RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 IBA57-AS1B1ANH7 110 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 M0R3E3 92 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 RGS13O14921 159 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 AGPAT2O15120 278 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 COX7A2P2O60397 106 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 GPX1P07203 203 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 METTL15P1P0C7V9 234 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 KRTAP10-4P60372 401 aaPredicted RBP10.75□□□□□ -0.69
USP48-210ENST00000489108 IQCF2Q8IXL9 164 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 ZNF479Q96JC4 524 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 AGPAT4-IT1Q9H0P7 198 aa10.75□□□□□ -0.69
USP48-210ENST00000489108 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
USP48-210ENST00000489108 FNDC10F2Z333 226 aa10.74□□□□□ -0.69
USP48-210ENST00000489108 SFT2D2O95562 160 aa10.74□□□□□ -0.69
USP48-210ENST00000489108 OR4E1P0C645 316 aa10.74□□□□□ -0.69
USP48-210ENST00000489108 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
USP48-210ENST00000489108 ZNF546Q86UE3 836 aa10.74□□□□□ -0.69
USP48-210ENST00000489108 LINC00477Q96M19 166 aa10.74□□□□□ -0.69
USP48-210ENST00000489108 IGHV1OR15-1A0A075B7D0 117 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 ORM1P02763 201 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 PPP1R1AQ13522 171 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 WFDC2Q14508 124 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 GUK1Q16774 197 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 PRR9Q5T870 116 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 OR10P1Q8NGE3 313 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 BLNKQ8WV28 456 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 SMIM8Q96KF7 97 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 ARPC5LQ9BPX5 153 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 MGAT4CQ9UBM8 478 aa10.73□□□□□ -0.69
USP48-210ENST00000489108 SSSCA1O60232 199 aa10.72□□□□□ -0.69
USP48-210ENST00000489108 CRISP2P16562 243 aa10.72□□□□□ -0.69
USP48-210ENST00000489108 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
USP48-210ENST00000489108 TMEM14EPQ6UXP3 125 aa10.72□□□□□ -0.69
USP48-210ENST00000489108 SCXQ7RTU7 201 aa10.72□□□□□ -0.69
USP48-210ENST00000489108 MRPL53Q96EL3 112 aaKnown RBP10.72□□□□□ -0.69
USP48-210ENST00000489108 DNAJC4Q9NNZ3 241 aa10.72□□□□□ -0.69
USP48-210ENST00000489108 RABL2AQ9UBK7 228 aaPredicted RBP10.72□□□□□ -0.69
USP48-210ENST00000489108 LOC100131303A0A0U1RQF7 123 aa10.71□□□□□ -0.69
USP48-210ENST00000489108 ARL16Q0P5N6 197 aa10.71□□□□□ -0.69
USP48-210ENST00000489108 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.69
USP48-210ENST00000489108 OR10G4Q8NGN3 311 aa10.71□□□□□ -0.69
USP48-210ENST00000489108 MGST2Q99735 147 aa10.71□□□□□ -0.69
USP48-210ENST00000489108 ZNF253O75346 499 aa10.7□□□□□ -0.7
USP48-210ENST00000489108 LINC01620Q4KN68 170 aa10.7□□□□□ -0.7
USP48-210ENST00000489108 RAB2BQ8WUD1 216 aa10.7□□□□□ -0.7
USP48-210ENST00000489108 TRBV19A0A075B6N1 114 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 C9JCJ5 164 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 NMBP08949 121 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 C9orf47Q6ZRZ4 202 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 SLC25A31Q9H0C2 315 aa10.69□□□□□ -0.7
USP48-210ENST00000489108 RSL24D1Q9UHA3 163 aaKnown RBP10.69□□□□□ -0.7
USP48-210ENST00000489108 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.68□□□□□ -0.7
USP48-210ENST00000489108 LECT2O14960 151 aa10.68□□□□□ -0.7
USP48-210ENST00000489108 NDUFB4O95168 129 aa10.68□□□□□ -0.7
USP48-210ENST00000489108 PPT1P50897 306 aa10.68□□□□□ -0.7
USP48-210ENST00000489108 TIRAPP58753 221 aa10.68□□□□□ -0.7
USP48-210ENST00000489108 RASL10AQ92737 203 aa10.68□□□□□ -0.7
USP48-210ENST00000489108 PRELID1Q9Y255 219 aa10.68□□□□□ -0.7
USP48-210ENST00000489108 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
USP48-210ENST00000489108 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
USP48-210ENST00000489108 FAUP35544 74 aaKnown RBP10.67□□□□□ -0.7
USP48-210ENST00000489108 SPCS2Q15005 226 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 MUC21Q5SSG8 566 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 MIC13Q5XKP0 118 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 Q6ZRG5 221 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 SH2D6Q7Z4S9 175 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 EXOC3-AS1Q8N2X6 119 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 MCFD2Q8NI22 146 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 SOSTQ9BQB4 213 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 TM2D2Q9BX73 214 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 SRRQ9GZT4 340 aa10.67□□□□□ -0.7
USP48-210ENST00000489108 TRAV8-6A0A0B4J262 113 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 CAMLGP49069 296 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 TMEM78Q5T7P6 136 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 SLC25A21Q9BQT8 299 aaPredicted RBP10.66□□□□□ -0.7
USP48-210ENST00000489108 CHAC1Q9BUX1 264 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 GGACTQ9BVM4 153 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 ZNF492Q9P255 531 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 TIMM9Q9Y5J7 89 aa10.66□□□□□ -0.7
USP48-210ENST00000489108 PKHD1L1Q86WI1 4243 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 TSC22D2O75157 780 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 SCGB1D2O95969 90 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 TNFSF8P32971 234 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 NRARPQ7Z6K4 114 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 CIRBP-AS1Q8TBR5 109 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 SPXQ9BT56 116 aa10.65□□□□□ -0.7
USP48-210ENST00000489108 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
USP48-210ENST00000489108 IGHV3-16A0A0C4DH30 117 aa10.64□□□□□ -0.71
USP48-210ENST00000489108 C9orf170A2RU37 121 aa10.64□□□□□ -0.71
USP48-210ENST00000489108 FABP12A6NFH5 140 aa10.64□□□□□ -0.71
USP48-210ENST00000489108 HIST1H1EP10412 219 aaKnown RBP10.64□□□□□ -0.71
USP48-210ENST00000489108 TAS2R30P59541 319 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms