RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SSNA1O43805 119 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 IGKV2D-40P01614 121 aaPredicted RBP8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 SLC25A5P05141 298 aaKnown RBP8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 NBEAP1P0C6P0 100 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 PDE6HQ13956 83 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 SOHLH1Q5JUK2 328 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 C1orf134Q5TEV5 83 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 FAM122CQ6P4D5 195 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 LINC00612Q8N6U2 182 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 PPP1R1CQ8WVI7 109 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 PYGO2Q9BRQ0 406 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 OR51M1Q9H341 326 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 AAMDCQ9H7C9 122 aa8.34□□□□□ -1.07
CCHCR1-215ENST00000488920 TRAV26-1A0A087WT03 109 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 A0A0J9YY99 117 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 ZNF324O75467 553 aaPredicted RBP8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 OR10J4P0C629 311 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 HOXA5P20719 270 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 CCL18P55774 89 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 BTN1A1Q13410 526 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 Q6ZTI0 123 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 ZNRF2Q8NHG8 242 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 FXYD5Q96DB9 178 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 GNPNAT1Q96EK6 184 aaPredicted RBP8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 FAM19A4Q96LR4 140 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 VGLL1Q99990 258 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 PAXXQ9BUH6 204 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 GSN-AS1Q9NRJ2 163 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 LINC00588Q9Y4M8 146 aa8.33□□□□□ -1.08
CCHCR1-215ENST00000488920 KLLNB2CW77 178 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 C17orf112F2Z3M2 114 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 MPC2O95563 127 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 GPX1P07203 203 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 M6PRP20645 277 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 DEFA1P59665 94 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 DEFA3P59666 94 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 DAZ2Q13117 558 aaKnown RBP8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 C9orf47Q6ZRZ4 202 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 ATP5SQ99766 215 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 SMIM3Q9BZL3 60 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 TMPRSS5Q9H3S3 457 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 KCNIP2Q9NS61 270 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 FUT9Q9Y231 359 aa8.32□□□□□ -1.08
CCHCR1-215ENST00000488920 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 OR7C2O60412 319 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 CRISP2P16562 243 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 RANP62826 216 aaKnown RBP8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 FFAR4Q5NUL3 377 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 TMEM78Q5T7P6 136 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 Q6ZQT7 251 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 SSX7Q7RTT5 188 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 ZFAND2AQ8N6M9 145 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 SCGB1C1Q8TD33 95 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 RXFP4Q8TDU9 374 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 PHYHIPLQ96FC7 376 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 MRPL32Q9BYC8 188 aaKnown RBP8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 HSPB11Q9Y547 144 aa8.31□□□□□ -1.08
CCHCR1-215ENST00000488920 TRGV2A0A075B6R0 118 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 TRGV1A0A0A0MS02 117 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 IFNA5P01569 189 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 RPL12P30050 165 aaKnown RBP8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 PRR9Q5T870 116 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 EIF4E3Q8N5X7 224 aaKnown RBP8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 ZNF680Q8NEM1 530 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 Q8TAT8 98 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 ZNF503Q96F45 646 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 LINC00467Q9BRT7 94 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 ZNF492Q9P255 531 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 MBD2Q9UBB5 411 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 TP53TG3Q9ULZ0 132 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 KLF12Q9Y4X4 402 aa8.3□□□□□ -1.08
CCHCR1-215ENST00000488920 PCLOQ9Y6V0 5065 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 RGS13O14921 159 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 NMBP08949 121 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 PET100P0DJ07 73 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 CSN1S1P47710 185 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 ZNF138P52744 262 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 ANXA2RQ3ZCQ2 193 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 Q9H8V8 135 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 WFDC1Q9HC57 220 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 PKD1P98161 4303 aa8.29□□□□□ -1.08
CCHCR1-215ENST00000488920 NACAE9PAV3 2078 aa8.28□□□□□ -1.08
CCHCR1-215ENST00000488920 UBE2L3P68036 154 aaKnown RBP8.28□□□□□ -1.08
CCHCR1-215ENST00000488920 TNP2Q05952 138 aa8.28□□□□□ -1.08
CCHCR1-215ENST00000488920 ESRGQ1W209 222 aa8.28□□□□□ -1.08
CCHCR1-215ENST00000488920 C6orf223Q8N319 242 aa8.28□□□□□ -1.08
CCHCR1-215ENST00000488920 Q9H3A6 140 aa8.28□□□□□ -1.08
CCHCR1-215ENST00000488920 IGHV1OR15-1A0A075B7D0 117 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 H3BNG1 76 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 SPINK4O60575 86 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 MED14OSP0DP75 135 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 TCL1AP56279 114 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 KHDC3LQ587J8 217 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 LYPD1Q8N2G4 141 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 HYLS1Q96M11 299 aa8.27□□□□□ -1.09
CCHCR1-215ENST00000488920 MRPL16Q9NX20 251 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms