RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 IGHV1-69P01742 117 aa14.27□□□□□ -0.12
COL16A1-215ENST00000488897 HTR1DP28221 377 aa14.27□□□□□ -0.12
COL16A1-215ENST00000488897 SIGLEC15Q6ZMC9 328 aa14.27□□□□□ -0.12
COL16A1-215ENST00000488897 MAP1LC3CQ9BXW4 147 aa14.27□□□□□ -0.12
COL16A1-215ENST00000488897 PSG8Q9UQ74 426 aa14.27□□□□□ -0.12
COL16A1-215ENST00000488897 NPFFO15130 113 aa14.27□□□□□ -0.13
COL16A1-215ENST00000488897 HLA-DRB1P01911 266 aa14.27□□□□□ -0.13
COL16A1-215ENST00000488897 PET117Q6UWS5 81 aa14.27□□□□□ -0.13
COL16A1-215ENST00000488897 ZNF491Q8N8L2 437 aa14.27□□□□□ -0.13
COL16A1-215ENST00000488897 GATD1Q8NB37 220 aa14.27□□□□□ -0.13
COL16A1-215ENST00000488897 RNF125Q96EQ8 232 aa14.27□□□□□ -0.13
COL16A1-215ENST00000488897 HSPB8Q9UJY1 196 aa14.27□□□□□ -0.13
COL16A1-215ENST00000488897 ZNF785A8K8V0 405 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 NBR2O15453 112 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 PSG3Q16557 428 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 C17orf77Q96MU5 243 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 ZNF48Q96MX3 618 aaPredicted RBP14.26□□□□□ -0.13
COL16A1-215ENST00000488897 TRAV30A0A087WSZ9 112 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 Q6AWC8 147 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 LINC00173Q6ZV60 143 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 DPM3Q9P2X0 92 aa14.26□□□□□ -0.13
COL16A1-215ENST00000488897 HSBP1L1C9JCN9 74 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 IL4P05112 153 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 UBE2E1P51965 193 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 DEFB112Q30KQ8 113 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 C1orf122Q6ZSJ8 110 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 ODF3BA8MYP8 253 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 OR11H6Q8NGC7 330 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 ZNF414Q96IQ9 312 aa14.25□□□□□ -0.13
COL16A1-215ENST00000488897 WI2-2373I1.2A0A1W2PRP0 233 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 MRPS12O15235 138 aaKnown RBP14.24□□□□□ -0.13
COL16A1-215ENST00000488897 ARMS2P0C7Q2 107 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 GATA3P23771 443 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 FCGR2BP31994 310 aaPredicted RBP14.24□□□□□ -0.13
COL16A1-215ENST00000488897 ZNF738Q8NE65 137 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 NPBQ8NG41 125 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 TCF21O43680 179 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 CEACAM3P40198 252 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 PDE6HQ13956 83 aa14.24□□□□□ -0.13
COL16A1-215ENST00000488897 NDUFA3O95167 84 aa14.23□□□□□ -0.13
COL16A1-215ENST00000488897 COX11Q9Y6N1 276 aa14.23□□□□□ -0.13
COL16A1-215ENST00000488897 GNG7O60262 68 aa14.23□□□□□ -0.13
COL16A1-215ENST00000488897 ZNF138P52744 262 aa14.23□□□□□ -0.13
COL16A1-215ENST00000488897 AAMDCQ9H7C9 122 aa14.23□□□□□ -0.13
COL16A1-215ENST00000488897 J3QLI3 93 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 CT45A10P0DMU9 189 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 LY6EQ16553 131 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 UNQ5815/PRO19632Q6UWF5 114 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 CFHR4Q92496 578 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 SERTM2A0A1B0GWG4 89 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 CRIP1P50238 77 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 SLC25A34Q6PIV7 304 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 MS4A6AQ9H2W1 248 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 AP5S1Q9NUS5 200 aa14.22□□□□□ -0.13
COL16A1-215ENST00000488897 hDV102S1A0JD36 115 aa14.21□□□□□ -0.13
COL16A1-215ENST00000488897 FSHBP01225 129 aa14.21□□□□□ -0.13
COL16A1-215ENST00000488897 CSN3P07498 182 aa14.21□□□□□ -0.13
COL16A1-215ENST00000488897 PTTG1IPP53801 180 aa14.21□□□□□ -0.13
COL16A1-215ENST00000488897 MFAP4P55083 255 aa14.21□□□□□ -0.13
COL16A1-215ENST00000488897 TMEM219Q86XT9 240 aa14.21□□□□□ -0.13
COL16A1-215ENST00000488897 IGHV4-59P01825 116 aa14.2□□□□□ -0.14
COL16A1-215ENST00000488897 CSN1S1P47710 185 aa14.2□□□□□ -0.14
COL16A1-215ENST00000488897 NPIPB5A8MRT5 1133 aa14.2□□□□□ -0.14
COL16A1-215ENST00000488897 C5orf64Q2M2E5 130 aa14.2□□□□□ -0.14
COL16A1-215ENST00000488897 ZNF493Q6ZR52 646 aa14.2□□□□□ -0.14
COL16A1-215ENST00000488897 FA2HQ7L5A8 372 aa14.2□□□□□ -0.14
COL16A1-215ENST00000488897 FBN1P35555 2871 aaKnown RBP14.2□□□□□ -0.14
COL16A1-215ENST00000488897 M0R3E3 92 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 PSG9Q00887 426 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 UBE2V1Q13404 147 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 LINC01545Q5VT33 79 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 PRSS3P2Q8NHM4 247 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 IGLV11-55A0A075B6I3 123 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 SRD5A1P18405 259 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 HES1Q14469 280 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 OR10AG1Q8NH19 301 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 FANCD2OSQ96PS1 177 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 ASCL2Q99929 193 aa14.19□□□□□ -0.14
COL16A1-215ENST00000488897 CCL25O15444 150 aa14.18□□□□□ -0.14
COL16A1-215ENST00000488897 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
COL16A1-215ENST00000488897 TPPP3Q9BW30 176 aa14.18□□□□□ -0.14
COL16A1-215ENST00000488897 SCRT2Q9NQ03 307 aa14.18□□□□□ -0.14
COL16A1-215ENST00000488897 CBY1Q9Y3M2 126 aa14.18□□□□□ -0.14
COL16A1-215ENST00000488897 ZNF562Q6V9R5 426 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 C8orf49Q96NF6 230 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 ATRQ13535 2644 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 TMEM189A5PLL7 270 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 HOXA3O43365 443 aaPredicted RBP14.17□□□□□ -0.14
COL16A1-215ENST00000488897 PIFOQ8TCI5 191 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 ZNF747Q9BV97 191 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 ESM1Q9NQ30 184 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 S4R3C0 116 aa14.17□□□□□ -0.14
COL16A1-215ENST00000488897 H3BUX3 64 aa14.16□□□□□ -0.14
COL16A1-215ENST00000488897 MPV17L2Q567V2 206 aa14.16□□□□□ -0.14
COL16A1-215ENST00000488897 C12orf54Q6X4T0 127 aa14.16□□□□□ -0.14
COL16A1-215ENST00000488897 TTC9CQ8N5M4 171 aa14.16□□□□□ -0.14
COL16A1-215ENST00000488897 ARPC1AQ92747 370 aa14.16□□□□□ -0.14
COL16A1-215ENST00000488897 THYN1Q9P016 225 aa14.16□□□□□ -0.14
COL16A1-215ENST00000488897 FBLL1A6NHQ2 334 aaKnown RBP14.16□□□□□ -0.14
COL16A1-215ENST00000488897 RELQ04864 619 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms