RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SERTM2A0A1B0GWG4 89 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 J3KRW8 73 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 CEBPGP53567 150 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 UBE2G1P62253 170 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 PMS2P11Q13670 270 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 HIST1H2BAQ96A08 127 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 TXNDC17Q9BRA2 123 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 SLC35B3Q9H1N7 401 aa9.08□□□□□ -0.96
TRAIP-209ENST00000488860 PDE6DO43924 150 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 FRMD6-AS1P0C7T7 363 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 CT45A10P0DMU9 189 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 DEFA6Q01524 100 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 PRNTQ86SH4 94 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 LINC00479Q96M42 142 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 AGPAT4-IT1Q9H0P7 198 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 MED9Q9NWA0 146 aa9.07□□□□□ -0.96
TRAIP-209ENST00000488860 M0R2Z0 102 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 CA1P00915 261 aaPredicted RBP9.06□□□□□ -0.96
TRAIP-209ENST00000488860 ZNF138P52744 262 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 APOC4P55056 127 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 FLI1Q01543 452 aaPredicted RBP9.06□□□□□ -0.96
TRAIP-209ENST00000488860 PEA15Q15121 130 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 Q86TA4 180 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 C11orf52Q96A22 123 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 FMC1Q96HJ9 113 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 LINC00477Q96M19 166 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 TREM1Q9NP99 234 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
TRAIP-209ENST00000488860 LEPP41159 167 aa9.05□□□□□ -0.96
TRAIP-209ENST00000488860 NUTF2P61970 127 aaKnown RBP9.05□□□□□ -0.96
TRAIP-209ENST00000488860 SRSF3P84103 164 aaKnown RBP9.05□□□□□ -0.96
TRAIP-209ENST00000488860 ZNF674Q2M3X9 581 aa9.05□□□□□ -0.96
TRAIP-209ENST00000488860 COMMD7Q86VX2 200 aa9.05□□□□□ -0.96
TRAIP-209ENST00000488860 C2CD4CQ8TF44 421 aa9.05□□□□□ -0.96
TRAIP-209ENST00000488860 NDFIP1Q9BT67 221 aa9.05□□□□□ -0.96
TRAIP-209ENST00000488860 DERL1Q9BUN8 251 aa9.05□□□□□ -0.96
TRAIP-209ENST00000488860 ZNF492Q9P255 531 aa9.05□□□□□ -0.96
TRAIP-209ENST00000488860 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
TRAIP-209ENST00000488860 A8MTW9 85 aa9.04□□□□□ -0.96
TRAIP-209ENST00000488860 A8MZ25 164 aa9.04□□□□□ -0.96
TRAIP-209ENST00000488860 MORN3Q6PF18 240 aaPredicted RBP9.04□□□□□ -0.96
TRAIP-209ENST00000488860 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
TRAIP-209ENST00000488860 ODF3Q96PU9 254 aa9.04□□□□□ -0.96
TRAIP-209ENST00000488860 CSTL1Q9H114 145 aa9.04□□□□□ -0.96
TRAIP-209ENST00000488860 XCL2Q9UBD3 114 aa9.04□□□□□ -0.96
TRAIP-209ENST00000488860 RAB19A4D1S5 217 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 FBLL1A6NHQ2 334 aaKnown RBP9.03□□□□□ -0.96
TRAIP-209ENST00000488860 IGLV2-11P01706 119 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 SRP19P09132 144 aaKnown RBP9.03□□□□□ -0.96
TRAIP-209ENST00000488860 TSPOP30536 169 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 RPL35P42766 123 aaKnown RBP9.03□□□□□ -0.96
TRAIP-209ENST00000488860 CDKN1BP46527 198 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 TMEM183BQ1AE95 376 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 NHLRC2Q8NBF2 726 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 CLUHP3Q96NS8 147 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 PARLQ9H300 379 aa9.03□□□□□ -0.96
TRAIP-209ENST00000488860 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 C9JQL5 133 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 TMEM250H0YL14 139 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 INSP01308 110 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 AMBPP02760 352 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 S100A9P06702 114 aaKnown RBP9.02□□□□□ -0.97
TRAIP-209ENST00000488860 GPX1P07203 203 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 BTN1A1Q13410 526 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 KIR3DS1Q14943 382 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 DEFB135Q30KP9 77 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 CENPWQ5EE01 88 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 PRR9Q5T870 116 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 GFI1BQ5VTD9 330 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 LINC00322Q6ZN03 302 aaPredicted RBP9.02□□□□□ -0.97
TRAIP-209ENST00000488860 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 KIR2DL5BQ8NHK3 375 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
TRAIP-209ENST00000488860 IGHV3OR16-12A0A075B7B8 117 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 LINC00862A6NCI5 91 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 CRISP2P16562 243 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 RNASE4P34096 147 aaKnown RBP9.01□□□□□ -0.97
TRAIP-209ENST00000488860 ZFAND2AQ8N6M9 145 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 FAM19A4Q96LR4 140 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 IGF2BP2-AS1Q96M15 143 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 C1QTNF4Q9BXJ3 329 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 KLF12Q9Y4X4 402 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 LENEPQ9Y5L5 61 aa9.01□□□□□ -0.97
TRAIP-209ENST00000488860 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 TRBV6-1A0A0K0K1D8 114 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 C7orf71A4D174 169 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 LTAP01374 205 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 GIG44P09565 113 aaPredicted RBP9□□□□□ -0.97
TRAIP-209ENST00000488860 MGST1P10620 155 aaKnown RBP9□□□□□ -0.97
TRAIP-209ENST00000488860 GNG4P50150 75 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 TAS2R60P59551 318 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 SMUG1Q53HV7 270 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 SAPCD1Q5SSQ6 148 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms