RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 NIPSNAP3BQ9BS92 247 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 SEC11CQ9BY50 192 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 MAP6D1Q9H9H5 199 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 ANK2Q01484 3957 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 IGKV2-40A0A087WW87 121 aaPredicted RBP7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 TRBV6-1A0A0K0K1D8 114 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 C9JCJ5 164 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 IGKV2D-40P01614 121 aaPredicted RBP7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 GNG4P50150 75 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 FLI1Q01543 452 aaPredicted RBP7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 C9orf47Q6ZRZ4 202 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 FAM24BQ8N5W8 94 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 LINC00477Q96M19 166 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 ZFP30Q9Y2G7 519 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 LENEPQ9Y5L5 61 aa7.88□□□□□ -1.15
HLA-DMB-261ENST00000487996 NPIPB6E9PJ23 425 aa7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 S100A6P06703 90 aa7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 HIST1H1AQ02539 215 aaPredicted RBP7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 DERL1Q9BUN8 251 aa7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 SAV1Q9H4B6 383 aaPredicted RBP7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 PPP1R14DQ9NXH3 145 aa7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 LY96Q9Y6Y9 160 aa7.87□□□□□ -1.15
HLA-DMB-261ENST00000487996 TRBV7-9A0A0J9YWB2 115 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 A0A0J9YX75 114 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 ZNF138P52744 262 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 PNRC1Q12796 327 aaPredicted RBP7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 TMEM241Q24JQ0 296 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 ODF3L2Q3SX64 289 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 CENPWQ5EE01 88 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 Q86TA4 180 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 BAGE2Q86Y30 109 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 NAT8Q9UHE5 227 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 PSG8Q9UQ74 426 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 TRAV34A0A0B4J273 112 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 PRAC2D3DTV9 90 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 LTAP01374 205 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 HLA-DRB4P13762 266 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 PRNTQ86SH4 94 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 LINC00479Q96M42 142 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 ODF3Q96PU9 254 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 VGLL1Q99990 258 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 CARHSP1Q9Y2V2 147 aaKnown RBP7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 HLA-DRB4X5D2U9 266 aa7.86□□□□□ -1.15
HLA-DMB-261ENST00000487996 TRAV8-1A0A0A6YYK1 113 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 IGLV2-11P01706 119 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 CT45A10P0DMU9 189 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 TSPOP30536 169 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 ACTL10Q5JWF8 245 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 C10orf91Q5T1B1 145 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 STHQ8IWL8 128 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 IGF2BP2-AS1Q96M15 143 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 CLUHP3Q96NS8 147 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 AGPAT4-IT1Q9H0P7 198 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 ZNF492Q9P255 531 aa7.85□□□□□ -1.15
HLA-DMB-261ENST00000487996 F6UB75 175 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 CD7P09564 240 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 ADCYAP1P18509 176 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 EGFEM1PQ0D2K5 195 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 OXLD1Q5BKU9 147 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 TMEM183AQ8IXX5 376 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 OR4B1Q8NGF8 309 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 SGK494Q96LW2 274 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 PRR25Q96S07 402 aa7.84□□□□□ -1.15
HLA-DMB-261ENST00000487996 TRBV20OR9-2A0A075B6H5 130 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 H3BMM0 161 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 LEPP41159 167 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 NUTF2P61970 127 aaKnown RBP7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 ERCC8Q13216 396 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 APRG1Q8IVJ8 170 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 SVBPQ8N300 66 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 SDF2L1Q9HCN8 221 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 KNCNA6PVL3 124 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 A8MTW9 85 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 APOC3P02656 99 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 ZNF705DP0CH99 300 aaPredicted RBP7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 ZNF705BP0CI00 300 aaPredicted RBP7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 GDF5OSQ5U4N7 250 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 COX8CQ7Z4L0 72 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 LINC01551Q86U37 167 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 Q8TAT8 98 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 C19orf73Q9NVV2 129 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 PKD1L1Q8TDX9 2849 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 AGRNO00468 2067 aa7.83□□□□□ -1.16
HLA-DMB-261ENST00000487996 B4DEV8 164 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 SNAPINO95295 136 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 AMBPP02760 352 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 MGST1P10620 155 aaKnown RBP7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 CRISP2P16562 243 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 DEFB1P60022 68 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 ADIRFQ15847 76 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 SAMD5Q5TGI4 173 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 OCC1Q8TAD7 63 aa7.82□□□□□ -1.16
HLA-DMB-261ENST00000487996 MLST8Q9BVC4 326 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms