RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TM2D2Q9BX73 214 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 TMEM222Q9H0R3 208 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 ENY2Q9NPA8 101 aa3.64□□□□□ -1.83
COL4A3-206ENST00000487633 HEYLQ9NQ87 328 aaPredicted RBP3.64□□□□□ -1.83
COL4A3-206ENST00000487633 A0A087WYN8 130 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 PIGBOS1A0A0B4J2F0 54 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 FAM240BA0A1B0GVZ2 78 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 SNRPGP15A8MWD9 76 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 LYRM1O43325 122 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 CDS2O95674 445 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 PRSS1P07477 247 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 ORM2P19652 201 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 SPCS3P61009 180 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 LAGE3Q14657 143 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 C4orf46Q504U0 113 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 TMEM128Q5BJH2 165 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 SELENOHQ8IZQ5 122 aaKnown RBP3.63□□□□□ -1.83
COL4A3-206ENST00000487633 LGI3Q8N145 548 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 Q8N976 141 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 OR10P1Q8NGE3 313 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 OR1B1Q8NGR6 318 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 GLYATL2Q8WU03 294 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 SLC25A31Q9H0C2 315 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 PRR13Q9NZ81 148 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 Q9UF83 564 aa3.63□□□□□ -1.83
COL4A3-206ENST00000487633 IGKV2D-24A0A075B6R9 120 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 TRAV6A0A075B6T7 132 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 A0A0B4J2A0 478 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 A0A0D9SG52 128 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 PMS2P5A8MQ11 134 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 CEBPZOSA8MTT3 80 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 PLA2G10O15496 165 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 UPK1BO75841 260 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 NDUFB6O95139 128 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 SFT2D2O95562 160 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 SULT1A3P0DMM9 295 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 SULT1A4P0DMN0 295 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 ANXA7P20073 488 aaKnown RBP3.62□□□□□ -1.83
COL4A3-206ENST00000487633 NUP62P37198 522 aaPredicted RBP3.62□□□□□ -1.83
COL4A3-206ENST00000487633 PPT1P50897 306 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 DEFA1P59665 94 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 DEFA3P59666 94 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 PRR3P79522 188 aaKnown RBP3.62□□□□□ -1.83
COL4A3-206ENST00000487633 PPP1R1AQ13522 171 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 CIRBPQ14011 172 aaKnown RBP3.62□□□□□ -1.83
COL4A3-206ENST00000487633 ANXA2RQ3ZCQ2 193 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 PATE2Q6UY27 113 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 LYZL2Q7Z4W2 148 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 FAM219AQ8IW50 185 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 IQCF2Q8IXL9 164 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 EIF4E3Q8N5X7 224 aaKnown RBP3.62□□□□□ -1.83
COL4A3-206ENST00000487633 NHLRC2Q8NBF2 726 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 OR1S1Q8NH92 325 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 ENKURQ8TC29 256 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 FAM19A4Q96LR4 140 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 TRGV9Q99603 122 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 C20orf85Q9H1P6 137 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.62□□□□□ -1.83
COL4A3-206ENST00000487633 SHPKQ9UHJ6 478 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 FLVCR2Q9UPI3 526 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 TMEM56-RWDD3S4R434 201 aa3.62□□□□□ -1.83
COL4A3-206ENST00000487633 A0A087X0K7 114 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 C9orf170A2RU37 121 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 C7orf71A4D174 169 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 KLLNB2CW77 178 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 C9JCJ5 164 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 TCRBP04435 133 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 HOXB5P09067 269 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 H2AFB2P0C5Z0 115 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 OR4E1P0C645 316 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 TIRAPP58753 221 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 UBE2MP61081 183 aaKnown RBP3.61□□□□□ -1.83
COL4A3-206ENST00000487633 SRSF9Q13242 221 aaKnown RBP eCLIP3.61□□□□□ -1.83
COL4A3-206ENST00000487633 TDRG1Q3Y452 100 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 IBA57Q5T440 356 aaKnown RBP3.61□□□□□ -1.83
COL4A3-206ENST00000487633 ETFRF1Q6IPR1 90 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 OR4D5Q8NGN0 318 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 OR10G4Q8NGN3 311 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 PCNPQ8WW12 178 aaKnown RBP3.61□□□□□ -1.83
COL4A3-206ENST00000487633 TXNDC17Q9BRA2 123 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 SHANK2-AS3Q9BTD1 123 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 ZNF331Q9NQX6 463 aaPredicted RBP3.61□□□□□ -1.83
COL4A3-206ENST00000487633 NUDT15Q9NV35 164 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 CACFD1Q9UGQ2 172 aa3.61□□□□□ -1.83
COL4A3-206ENST00000487633 TRAV8-6A0A0B4J262 113 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 DUXBA0A1W2PPF3 345 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 FAM25EA8MYX2 175 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 PRSS46E5RG02 174 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 ORM1P02763 201 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 SLPIP03973 132 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 RNASE4P34096 147 aaKnown RBP3.6□□□□□ -1.83
COL4A3-206ENST00000487633 BTCP35070 178 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 IFITM3Q01628 133 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 SLAQ13239 276 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 SMCO1Q147U7 214 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 PRR4Q16378 134 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 SAMD13Q5VXD3 122 aa3.6□□□□□ -1.83
COL4A3-206ENST00000487633 GGNBP1Q5YKI7 109 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms