RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 DEFB136Q30KP8 78 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 SMUG1Q53HV7 270 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 CT83Q5H943 113 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 IGFL4Q6B9Z1 124 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 PRR27Q6MZM9 219 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 C9orf47Q6ZRZ4 202 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 COX8CQ7Z4L0 72 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 RNF182Q8N6D2 247 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 C11orf44Q8N8P7 122 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 ZNF738Q8NE65 137 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 NUDT10Q8NFP7 164 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 OR10J6PQ8NGY7 276 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 NUDT11Q96G61 164 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 RAX2Q96IS3 184 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 FAM210BQ96KR6 192 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 PRR25Q96S07 402 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 VGLL1Q99990 258 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 PYGO2Q9BRQ0 406 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 RNASE7Q9H1E1 156 aaKnown RBP4.66□□□□□ -1.66
VAMP3-203ENST00000487194 PPP1R14DQ9NXH3 145 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 V9GYV3 84 aa4.66□□□□□ -1.66
VAMP3-203ENST00000487194 TGIF2-C20orf24A0A0A6YYL0 155 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 TRAV25A0A0B4J276 109 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 TRBV7-9A0A0J9YWB2 115 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 A0A1W2PPQ1 181 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 A0A1W2PRX2 142 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 C19orf71A6NCJ1 209 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 FAM231BA6NCW3 169 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 A8MWL6 223 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 C1orf196B1AJZ1 125 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 PRAC2D3DTV9 90 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 TYMSP04818 313 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 RPS10P46783 165 aaKnown RBP4.65□□□□□ -1.67
VAMP3-203ENST00000487194 ZNF138P52744 262 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 RAB5BP61020 215 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 COX19Q49B96 90 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 FAM162BQ5T6X4 162 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 RBPMS2Q6ZRY4 209 aaKnown RBP4.65□□□□□ -1.67
VAMP3-203ENST00000487194 NDUFA11Q86Y39 141 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 DYNLRB2Q8TF09 96 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 DCANP1Q8TF63 244 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 TSKUQ8WUA8 353 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 DLX4Q92988 240 aaPredicted RBP4.65□□□□□ -1.67
VAMP3-203ENST00000487194 LINC00477Q96M19 166 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 DUX3Q96PT4 197 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 MS4A6AQ9H2W1 248 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 RPP21Q9H633 154 aaKnown RBP4.65□□□□□ -1.67
VAMP3-203ENST00000487194 SRD5A3Q9H8P0 318 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 SIGLEC8Q9NYZ4 499 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 TMA7Q9Y2S6 64 aaKnown RBP4.65□□□□□ -1.67
VAMP3-203ENST00000487194 LENEPQ9Y5L5 61 aa4.65□□□□□ -1.67
VAMP3-203ENST00000487194 IGKV3-7A0A075B6H7 116 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 SMIM27A0A1W2PRY6 76 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 XKRY2A2RUG3 117 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 NPIPB6E9PJ23 425 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 K7EQG2 157 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 CSN3P07498 182 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 CXCL1P09341 107 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 EDN2P20800 178 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 FAM3BP58499 235 aaPredicted RBP4.64□□□□□ -1.67
VAMP3-203ENST00000487194 RPS20P60866 119 aaKnown RBP4.64□□□□□ -1.67
VAMP3-203ENST00000487194 SRSF2Q01130 221 aaKnown RBP4.64□□□□□ -1.67
VAMP3-203ENST00000487194 ADAMTSL5Q6ZMM2 481 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 WFDC3Q8IUB2 231 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 OR8A1Q8NGG7 326 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 ZC2HC1AQ96GY0 325 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 C20orf173Q96LM9 149 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 ASCL2Q99929 193 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 GFRA4Q9GZZ7 299 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 AGPAT4-IT1Q9H0P7 198 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 NAT8BQ9UHF3 227 aa4.64□□□□□ -1.67
VAMP3-203ENST00000487194 CUBNO60494 3623 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 IZUMO1RA6ND01 250 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 OR4C46A6NHA9 309 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 FABP5P3A8MUU1 101 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 DUSP14O95147 198 aaKnown RBP4.63□□□□□ -1.67
VAMP3-203ENST00000487194 TFPI2P48307 235 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 HIST1H1AQ02539 215 aaPredicted RBP4.63□□□□□ -1.67
VAMP3-203ENST00000487194 ERCC8Q13216 396 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 DEFB114Q30KQ6 69 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 NSUN5P1Q3KNT7 163 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 Q6AWC8 147 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 EBLN2Q6P2I7 272 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 RASL11AQ6T310 242 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 LINC00322Q6ZN03 302 aaPredicted RBP4.63□□□□□ -1.67
VAMP3-203ENST00000487194 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 Q8TAT8 98 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 C8orf49Q96NF6 230 aa4.63□□□□□ -1.67
VAMP3-203ENST00000487194 SPAG8Q99932 426 aaPredicted RBP4.63□□□□□ -1.67
VAMP3-203ENST00000487194 SAV1Q9H4B6 383 aaPredicted RBP4.63□□□□□ -1.67
VAMP3-203ENST00000487194 TMEM189A5PLL7 270 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 ADARB2-AS1A8MUL3 147 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 SH2D1AO60880 128 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 CA1P00915 261 aaPredicted RBP4.62□□□□□ -1.67
VAMP3-203ENST00000487194 PF4P02776 101 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 MT-ND6P03923 174 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 ZNF688P0C7X2 276 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 CRISP2P16562 243 aa4.62□□□□□ -1.67
VAMP3-203ENST00000487194 LEPP41159 167 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms