RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
HMGN1-216ENST00000486741 MAP1AP78559 2803 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-216ENST00000486741 NBEAQ8NFP9 2946 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 IGHV4-30-2A0A087WSY4 118 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 TMEM249Q2WGJ8 235 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 FASNP49327 2511 aaKnown RBP10.42□□□□□ -0.74
HMGN1-216ENST00000486741 IGHV7-81A0A0B4J1V7 117 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 FBXL19-AS1Q494R0 122 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 FAM110DQ8TAY7 271 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-216ENST00000486741 RCHY1Q96PM5 261 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 SRSF8Q9BRL6 282 aaKnown RBP10.42□□□□□ -0.74
HMGN1-216ENST00000486741 IGHV4-38-2P0DP08 117 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 ZNF502Q8TBZ5 544 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 C18orf32Q8TCD1 76 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 ZC2HC1AQ96GY0 325 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 LINC00574Q9H8X3 128 aa10.42□□□□□ -0.74
HMGN1-216ENST00000486741 Q6AWC8 147 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 VGLL1Q99990 258 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 H3BRN7 92 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 FCN3O75636 299 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 UBE2V1Q13404 147 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 TMEM95Q3KNT9 176 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 PSMG4Q5JS54 123 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 ATP5L2Q7Z4Y8 100 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 ZNF414Q96IQ9 312 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 TMEM160Q9NX00 188 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 IGKV1D-37A0A075B6S9 117 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 ASIPP42127 132 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 RHPN1-AS1Q9BWJ2 59 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 BLCAPP62952 87 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 ZNF56Q15929 161 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 SCGB1D4Q6XE38 83 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 PRSS22Q9GZN4 317 aa10.41□□□□□ -0.74
HMGN1-216ENST00000486741 TRBV7-1A0A0A6YYK4 115 aa10.4□□□□□ -0.74
HMGN1-216ENST00000486741 CD7P09564 240 aa10.4□□□□□ -0.74
HMGN1-216ENST00000486741 Q6ZWC4 215 aa10.4□□□□□ -0.74
HMGN1-216ENST00000486741 PRRC2AP48634 2157 aaKnown RBP10.4□□□□□ -0.74
HMGN1-216ENST00000486741 CENPVL3A0A0U1RRI6 287 aa10.4□□□□□ -0.74
HMGN1-216ENST00000486741 PYGO2Q9BRQ0 406 aa10.4□□□□□ -0.74
HMGN1-216ENST00000486741 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.75
HMGN1-216ENST00000486741 H3BUT2 72 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 SPRY2O43597 315 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 TMEM97Q5BJF2 176 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 LYPD1Q8N2G4 141 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 GP9P14770 177 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 IL17RELQ6ZVW7 336 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 LINC01548A6NM66 108 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 LEPP41159 167 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 YAE1D1Q9NRH1 226 aa10.39□□□□□ -0.75
HMGN1-216ENST00000486741 Q1RN00 199 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 Q6ZVH6 145 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 Q8N9W7 124 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 hDV102S1A0JD36 115 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 CACNG7P62955 275 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 FOXC2Q99958 501 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 TRAV8-6A0A0B4J262 113 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 SYNJ2BPP57105 145 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 AKAP13Q12802 2813 aa10.38□□□□□ -0.75
HMGN1-216ENST00000486741 CTSGP08311 255 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 IFI27P40305 119 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-216ENST00000486741 C1orf122Q6ZSJ8 110 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 DTX2Q86UW9 622 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 TTC9CQ8N5M4 171 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 PRR25Q96S07 402 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 PDE6HQ13956 83 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 ZNF256Q9Y2P7 627 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-216ENST00000486741 ACANP16112 2415 aa10.37□□□□□ -0.75
HMGN1-216ENST00000486741 IGLV11-55A0A075B6I3 123 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 TRAV12-3A0A0B4J271 114 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 Q0VG73 95 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 BCL6BQ8N143 479 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-216ENST00000486741 SPCS1Q9Y6A9 102 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 TNRC18O15417 2968 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-216ENST00000486741 FN1P02751 2386 aaKnown RBP10.36□□□□□ -0.75
HMGN1-216ENST00000486741 A0A1B0GW15 77 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 IGHV4-59P01825 116 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 C1orf159Q96HA4 380 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 TRAV21A0A0B4J279 112 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 FANCD2OSQ96PS1 177 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 TMEM14CQ9P0S9 112 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 TRAV9-2A0A087WT02 112 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 F6UB75 175 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
HMGN1-216ENST00000486741 TNRC6BQ9UPQ9 1833 aaKnown RBP10.35□□□□□ -0.75
HMGN1-216ENST00000486741 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGN1-216ENST00000486741 MPV17L2Q567V2 206 aa10.35□□□□□ -0.75
HMGN1-216ENST00000486741 NPBQ8NG41 125 aa10.35□□□□□ -0.75
HMGN1-216ENST00000486741 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms