RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 TRGV1A0A0A0MS02 117 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 MRPL27Q9P0M9 148 aaKnown RBP10.67□□□□□ -0.7
PKD1-219ENST00000486339 LSM4Q9Y4Z0 139 aaKnown RBP10.67□□□□□ -0.7
PKD1-219ENST00000486339 ZNF462Q96JM2 2506 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
PKD1-219ENST00000486339 ARHGAP21Q5T5U3 1957 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 NDUFS6O75380 124 aaKnown RBP10.67□□□□□ -0.7
PKD1-219ENST00000486339 GCSHP23434 173 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
PKD1-219ENST00000486339 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.7
PKD1-219ENST00000486339 JOSD1Q15040 202 aaPredicted RBP10.67□□□□□ -0.7
PKD1-219ENST00000486339 MEIG1Q5JSS6 88 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 GFI1BQ5VTD9 330 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 ODF3L1Q8IXM7 274 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 CYSLTR1Q9Y271 337 aa10.67□□□□□ -0.7
PKD1-219ENST00000486339 LMO4P61968 165 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
PKD1-219ENST00000486339 PET117Q6UWS5 81 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 D6R8Y8 96 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 CGB3P0DN86 165 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 CGB7P0DN87 165 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 IFI27P40305 119 aaPredicted RBP10.66□□□□□ -0.7
PKD1-219ENST00000486339 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 HIST1H4GQ99525 98 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 IGLV2-14P01704 120 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 VWC2Q2TAL6 325 aa10.66□□□□□ -0.7
PKD1-219ENST00000486339 ARMS2P0C7Q2 107 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 NIT1Q86X76 327 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 IGHV7-4-1A0A0J9YVY3 117 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 K7EIM0 57 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 FXYD5Q96DB9 178 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 VCX2Q9H322 139 aa10.65□□□□□ -0.7
PKD1-219ENST00000486339 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.71
PKD1-219ENST00000486339 ZNF843Q8N446 348 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 XCL2Q9UBD3 114 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 IGKV1-17P01599 117 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 RAB37Q96AX2 223 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 IGLV11-55A0A075B6I3 123 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 ZNF114Q8NC26 417 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 Q6ZPA2 131 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 PRR25Q96S07 402 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 PMCHL2Q9BQD1 86 aa10.64□□□□□ -0.71
PKD1-219ENST00000486339 PFN1P07737 140 aaKnown RBP10.63□□□□□ -0.71
PKD1-219ENST00000486339 DEFB121Q5J5C9 76 aa10.63□□□□□ -0.71
PKD1-219ENST00000486339 C5orf56Q8N8D9 126 aa10.63□□□□□ -0.71
PKD1-219ENST00000486339 I3L2K1 104 aa10.63□□□□□ -0.71
PKD1-219ENST00000486339 PROP1O75360 226 aa10.63□□□□□ -0.71
PKD1-219ENST00000486339 DNLZQ5SXM8 178 aa10.63□□□□□ -0.71
PKD1-219ENST00000486339 ST6GALNAC6Q969X2 333 aa10.63□□□□□ -0.71
PKD1-219ENST00000486339 CHCHD1Q96BP2 118 aaKnown RBP10.63□□□□□ -0.71
PKD1-219ENST00000486339 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
PKD1-219ENST00000486339 C14orf144Q96I85 54 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 SMPXQ9UHP9 88 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 IGLV2-23P01705 113 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 IGHV3-53P01767 116 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 LGALS1P09382 135 aaKnown RBP10.62□□□□□ -0.71
PKD1-219ENST00000486339 ZNF876PQ49A33 203 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 C11orf52Q96A22 123 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 C8orf49Q96NF6 230 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 LINC00574Q9H8X3 128 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
PKD1-219ENST00000486339 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
PKD1-219ENST00000486339 IFI27L1Q96BM0 104 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 CHCHD5Q9BSY4 110 aa10.62□□□□□ -0.71
PKD1-219ENST00000486339 COL5A1P20908 1838 aaPredicted RBP10.62□□□□□ -0.71
PKD1-219ENST00000486339 H3BRM9 83 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 H7C2G1 150 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 AMBPP02760 352 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 ERASQ7Z444 233 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 GFRA4Q9GZZ7 299 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 GAGE10A6NGK3 116 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 NDUFA3O95167 84 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 RIPPLY3P57055 190 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 DEFB136Q30KP8 78 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 PRADC1Q9BSG0 188 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 ALKBH7Q9BT30 221 aaPredicted RBP10.61□□□□□ -0.71
PKD1-219ENST00000486339 ARHGAP32A7KAX9 2087 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 FAM231BA6NCW3 169 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
PKD1-219ENST00000486339 CT83Q5H943 113 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 LY6G5BQ8NDX9 201 aa10.61□□□□□ -0.71
PKD1-219ENST00000486339 PKD1L2Q7Z442 2459 aa10.6□□□□□ -0.71
PKD1-219ENST00000486339 FOXE3Q13461 319 aa10.6□□□□□ -0.71
PKD1-219ENST00000486339 TSSC4Q9Y5U2 329 aaPredicted RBP10.6□□□□□ -0.71
PKD1-219ENST00000486339 A0A087WWL8 130 aa10.6□□□□□ -0.71
PKD1-219ENST00000486339 CTSGP08311 255 aa10.6□□□□□ -0.71
PKD1-219ENST00000486339 C17orf77Q96MU5 243 aa10.6□□□□□ -0.71
PKD1-219ENST00000486339 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms