RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ZNF680Q8NEM1 530 aa4.16□□□□□ -1.74
COPS3-208ENST00000486032 OR10J6PQ8NGY7 276 aa4.16□□□□□ -1.74
COPS3-208ENST00000486032 MBD3L1Q8WWY6 194 aa4.16□□□□□ -1.74
COPS3-208ENST00000486032 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
COPS3-208ENST00000486032 YTHDF2Q9Y5A9 579 aaKnown RBP4.16□□□□□ -1.74
COPS3-208ENST00000486032 AGRNO00468 2067 aa4.15□□□□□ -1.74
COPS3-208ENST00000486032 LOC102724200A0A096LPH7 203 aaPredicted RBP4.15□□□□□ -1.75
COPS3-208ENST00000486032 A0A0J9YX75 114 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 RBMY1BA6NDE4 496 aaKnown RBP4.15□□□□□ -1.75
COPS3-208ENST00000486032 RBMY1EA6NEQ0 496 aaKnown RBP4.15□□□□□ -1.75
COPS3-208ENST00000486032 ZNF253O75346 499 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 DUSP14O95147 198 aaKnown RBP4.15□□□□□ -1.75
COPS3-208ENST00000486032 RBMY1DP0C7P1 496 aaKnown RBP4.15□□□□□ -1.75
COPS3-208ENST00000486032 ATP5G3P48201 142 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 CNN1P51911 297 aaKnown RBP4.15□□□□□ -1.75
COPS3-208ENST00000486032 PDE6HQ13956 83 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 FOXI2Q6ZQN5 318 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 GOLT1AQ6ZVE7 132 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 OR8A1Q8NGG7 326 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 RXFP4Q8TDU9 374 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 SPATA25Q9BR10 227 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 SAV1Q9H4B6 383 aaPredicted RBP4.15□□□□□ -1.75
COPS3-208ENST00000486032 OTORQ9NRC9 128 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 CLEC5AQ9NY25 188 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 PRELID1Q9Y255 219 aa4.15□□□□□ -1.75
COPS3-208ENST00000486032 TRAV12-2A0A075B6T6 113 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 IGHV3OR16-12A0A075B7B8 117 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 TRAV34A0A0B4J273 112 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 FAM74A7A6NL05 159 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 GGTLC3B5MD39 225 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 DIRC3C9JPN6 131 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 C11orf94C9JXX5 98 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 H3BMM0 161 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 M0R2Z0 102 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 CA1P00915 261 aaPredicted RBP4.14□□□□□ -1.75
COPS3-208ENST00000486032 IFNA1P01562 189 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 HLA-DRB4P13762 266 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 PPT1P50897 306 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 CEBPGP53567 150 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 RAB14P61106 215 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 IFITM2Q01629 132 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 SPINK13Q1W4C9 94 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 TMEM78Q5T7P6 136 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 TRPT1Q86TN4 253 aaKnown RBP4.14□□□□□ -1.75
COPS3-208ENST00000486032 LYPD1Q8N2G4 141 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 Q8TAT8 98 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 SUN5Q8TC36 379 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 VGLL1Q99990 258 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 SLC35B3Q9H1N7 401 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 RETNQ9HD89 108 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 HLA-DRB4X5D2U9 266 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 TGP01266 2768 aa4.14□□□□□ -1.75
COPS3-208ENST00000486032 TRAV8-1A0A0A6YYK1 113 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 TRAV1-1A0A0B4J248 108 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 A0A1W2PRE2 83 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 K7EQM0 130 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 PEX7O00628 323 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 TCRAP04437 139 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 AKR1C3P42330 323 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 APOC4P55056 127 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 NUTF2P61970 127 aaKnown RBP4.13□□□□□ -1.75
COPS3-208ENST00000486032 DEFB135Q30KP9 77 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 TOR2AQ5JU69 321 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 ZNF767PQ75MW2 155 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 PRNTQ86SH4 94 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 SBSPONQ8IVN8 264 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 C5orf17Q8NAS9 161 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 MRPL53Q96EL3 112 aaKnown RBP4.13□□□□□ -1.75
COPS3-208ENST00000486032 LINC00479Q96M42 142 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 RARRES2Q99969 163 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 EIF5A2Q9GZV4 153 aaKnown RBP4.13□□□□□ -1.75
COPS3-208ENST00000486032 AGPAT4-IT1Q9H0P7 198 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 CSTL1Q9H114 145 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 MANBALQ9NQG1 85 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 XCL2Q9UBD3 114 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 EPDR1Q9UM22 224 aa4.13□□□□□ -1.75
COPS3-208ENST00000486032 LOC102723971A0A1B0GUV8 181 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 RBFOX3A6NFN3 312 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 F6UZH7 168 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 NMBP08949 121 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 CT45A10P0DMU9 189 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 BCL2P10415 239 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 ZNF138P52744 262 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 UBE2G1P62253 170 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 ZNF674Q2M3X9 581 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 CYB561D1Q8N8Q1 229 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 LINC00477Q96M19 166 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 ATG101Q9BSB4 218 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 TMEM208Q9BTX3 173 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 NKX6-2Q9C056 277 aaPredicted RBP4.12□□□□□ -1.75
COPS3-208ENST00000486032 MED9Q9NWA0 146 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 VAX2Q9UIW0 290 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 PSG8Q9UQ74 426 aa4.12□□□□□ -1.75
COPS3-208ENST00000486032 DYNC2H1Q8NCM8 4307 aaKnown RBP4.12□□□□□ -1.75
COPS3-208ENST00000486032 SACSQ9NZJ4 4579 aa4.11□□□□□ -1.75
COPS3-208ENST00000486032 TRAV12-3A0A0B4J271 114 aa4.11□□□□□ -1.75
COPS3-208ENST00000486032 A8MZ25 164 aa4.11□□□□□ -1.75
COPS3-208ENST00000486032 INSP01308 110 aa4.11□□□□□ -1.75
COPS3-208ENST00000486032 GPX1P07203 203 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms