RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ATP5G1P05496 136 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 GPX1P07203 203 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 ATP5G3P48201 142 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 UBE2L3P68036 154 aaKnown RBP12.47□□□□□ -0.41
COL6A1-204ENST00000486023 CD300CQ08708 224 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 BTN1A1Q13410 526 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 TMEM78Q5T7P6 136 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 RNASE8Q8TDE3 154 aaKnown RBP12.47□□□□□ -0.41
COL6A1-204ENST00000486023 LINC00477Q96M19 166 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 VGLL1Q99990 258 aa12.47□□□□□ -0.41
COL6A1-204ENST00000486023 IGLV2-18A0A075B6J9 118 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 C7orf71A4D174 169 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 CBY3A6NI87 242 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 GAGE7O76087 117 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 NUDT3O95989 172 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
COL6A1-204ENST00000486023 GAGE12FP0CL80 117 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 GAGE12GP0CL81 117 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 GAGE12IP0CL82 117 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 CSN1S1P47710 185 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 HYLS1Q96M11 299 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 ODF3Q96PU9 254 aa12.46□□□□□ -0.41
COL6A1-204ENST00000486023 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.42
COL6A1-204ENST00000486023 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
COL6A1-204ENST00000486023 HMGB3O15347 200 aaKnown RBP12.45□□□□□ -0.42
COL6A1-204ENST00000486023 TAS2R45P59539 299 aa12.45□□□□□ -0.42
COL6A1-204ENST00000486023 OR5I1Q13606 314 aa12.45□□□□□ -0.42
COL6A1-204ENST00000486023 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
COL6A1-204ENST00000486023 RPH3ALQ9UNE2 315 aa12.45□□□□□ -0.42
COL6A1-204ENST00000486023 ACOT6Q3I5F7 207 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-204ENST00000486023 KHDC3LQ587J8 217 aa12.44□□□□□ -0.42
COL6A1-204ENST00000486023 Q8TAT8 98 aa12.44□□□□□ -0.42
COL6A1-204ENST00000486023 PYGO2Q9BRQ0 406 aa12.44□□□□□ -0.42
COL6A1-204ENST00000486023 ATG101Q9BSB4 218 aa12.44□□□□□ -0.42
COL6A1-204ENST00000486023 Q9H3A6 140 aa12.44□□□□□ -0.42
COL6A1-204ENST00000486023 RAB2AP61019 212 aa12.43□□□□□ -0.42
COL6A1-204ENST00000486023 Q5BKY6 102 aa12.43□□□□□ -0.42
COL6A1-204ENST00000486023 C9orf47Q6ZRZ4 202 aa12.43□□□□□ -0.42
COL6A1-204ENST00000486023 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
COL6A1-204ENST00000486023 DNAH2Q9P225 4427 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 DNAH6Q9C0G6 4158 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 M6PRP20645 277 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 Q6ZQT7 251 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 C15orf53Q8NAA6 179 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 GSN-AS1Q9NRJ2 163 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
COL6A1-204ENST00000486023 PGPA6NDG6 321 aa12.41□□□□□ -0.42
COL6A1-204ENST00000486023 KLLNB2CW77 178 aa12.41□□□□□ -0.42
COL6A1-204ENST00000486023 RGS13O14921 159 aa12.41□□□□□ -0.42
COL6A1-204ENST00000486023 ZNF324O75467 553 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-204ENST00000486023 ZNF138P52744 262 aa12.41□□□□□ -0.42
COL6A1-204ENST00000486023 PRR9Q5T870 116 aa12.41□□□□□ -0.42
COL6A1-204ENST00000486023 FAM19A4Q96LR4 140 aa12.41□□□□□ -0.42
COL6A1-204ENST00000486023 A0A0J9YY99 117 aa12.4□□□□□ -0.42
COL6A1-204ENST00000486023 Q6ZTI0 123 aa12.4□□□□□ -0.42
COL6A1-204ENST00000486023 EIF4E3Q8N5X7 224 aaKnown RBP12.4□□□□□ -0.42
COL6A1-204ENST00000486023 CMTM2Q8TAZ6 248 aa12.4□□□□□ -0.42
COL6A1-204ENST00000486023 FXYD6-FXYD2A0A087WZ82 144 aa12.39□□□□□ -0.43
COL6A1-204ENST00000486023 CRISP2P16562 243 aa12.39□□□□□ -0.43
COL6A1-204ENST00000486023 ZNF266Q14584 549 aa12.39□□□□□ -0.43
COL6A1-204ENST00000486023 LYPD1Q8N2G4 141 aa12.39□□□□□ -0.43
COL6A1-204ENST00000486023 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
COL6A1-204ENST00000486023 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
COL6A1-204ENST00000486023 TP53TG3Q9ULZ0 132 aa12.39□□□□□ -0.43
COL6A1-204ENST00000486023 TRGV2A0A075B6R0 118 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 TRAV26-1A0A087WT03 109 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 TRGV1A0A0A0MS02 117 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 DIRC3C9JPN6 131 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 GIPP09681 153 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-204ENST00000486023 RGS21Q2M5E4 152 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 RNF212Q495C1 297 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 ZNF680Q8NEM1 530 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 AQP10Q96PS8 301 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 ARPC5LQ9BPX5 153 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 OTORQ9NRC9 128 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
COL6A1-204ENST00000486023 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
COL6A1-204ENST00000486023 ATP6V0CP27449 155 aa12.37□□□□□ -0.43
COL6A1-204ENST00000486023 FAM74A1Q5RGS3 127 aa12.37□□□□□ -0.43
COL6A1-204ENST00000486023 GNPNAT1Q96EK6 184 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-204ENST00000486023 TMPRSS5Q9H3S3 457 aa12.37□□□□□ -0.43
COL6A1-204ENST00000486023 NMBP08949 121 aa12.36□□□□□ -0.43
COL6A1-204ENST00000486023 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
COL6A1-204ENST00000486023 HOXA5P20719 270 aa12.36□□□□□ -0.43
COL6A1-204ENST00000486023 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-204ENST00000486023 DAZ2Q13117 558 aaKnown RBP12.36□□□□□ -0.43
COL6A1-204ENST00000486023 PQLC2Q6ZP29 291 aa12.36□□□□□ -0.43
COL6A1-204ENST00000486023 IQCF2Q8IXL9 164 aa12.36□□□□□ -0.43
COL6A1-204ENST00000486023 SH3BGRL3Q9H299 93 aa12.36□□□□□ -0.43
COL6A1-204ENST00000486023 RBAKDNA6NC62 111 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 CCL18P55774 89 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 GNG5P63218 68 aa12.35□□□□□ -0.43
COL6A1-204ENST00000486023 ANXA2RQ3ZCQ2 193 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms