RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 C9orf47Q6ZRZ4 202 aa6.06□□□□□ -1.44
SF3A1-208ENST00000485618 OR11H2Q8NH07 326 aa6.06□□□□□ -1.44
SF3A1-208ENST00000485618 HIST1H2BAQ96A08 127 aa6.06□□□□□ -1.44
SF3A1-208ENST00000485618 ZNF503Q96F45 646 aa6.06□□□□□ -1.44
SF3A1-208ENST00000485618 TXNDC17Q9BRA2 123 aa6.06□□□□□ -1.44
SF3A1-208ENST00000485618 NDFIP1Q9BT67 221 aa6.06□□□□□ -1.44
SF3A1-208ENST00000485618 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
SF3A1-208ENST00000485618 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
SF3A1-208ENST00000485618 AGRNO00468 2067 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 TMEM189A5PLL7 270 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 NPIPB6E9PJ23 425 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 M0R3E3 92 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 S100A9P06702 114 aaKnown RBP6.05□□□□□ -1.44
SF3A1-208ENST00000485618 GPX1P07203 203 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 ZNF705DP0CH99 300 aaPredicted RBP6.05□□□□□ -1.44
SF3A1-208ENST00000485618 ZNF705BP0CI00 300 aaPredicted RBP6.05□□□□□ -1.44
SF3A1-208ENST00000485618 ZNF138P52744 262 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 FGF8P55075 233 aaPredicted RBP6.05□□□□□ -1.44
SF3A1-208ENST00000485618 CD300CQ08708 224 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 CCDC28AQ8IWP9 274 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 OVOL2Q9BRP0 275 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 NIPSNAP3BQ9BS92 247 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 MANBALQ9NQG1 85 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 EPDR1Q9UM22 224 aa6.05□□□□□ -1.44
SF3A1-208ENST00000485618 NKX2-5P52952 324 aaPredicted RBP6.04□□□□□ -1.44
SF3A1-208ENST00000485618 UBE2G2P60604 165 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 ZNF726P1Q15940 193 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 SPINK13Q1W4C9 94 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 SAPCD1Q5SSQ6 148 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 GOLT1AQ6ZVE7 132 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 CYB561D1Q8N8Q1 229 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 MUC7Q8TAX7 377 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 LINC01587Q99440 93 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 NEU1Q99519 415 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 ATG101Q9BSB4 218 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 AGPAT4-IT1Q9H0P7 198 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 SLC35B3Q9H1N7 401 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 ZNF492Q9P255 531 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 RPH3ALQ9UNE2 315 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
SF3A1-208ENST00000485618 IGHV3OR16-12A0A075B7B8 117 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 TEX48A0A1B0GUV7 120 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 FAM74A7A6NL05 159 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 PRAC2D3DTV9 90 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 H7BYZ3 331 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 M0R2Z0 102 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 TCRAP04437 139 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 CT45A10P0DMU9 189 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 FXYD7P58549 80 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 DEFB1P60022 68 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 RAB14P61106 215 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 PMS2P11Q13670 270 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 RRN3P1Q2M238 152 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 CASC10Q5T4H9 136 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 AMTNQ6UX39 209 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 TMPRSS5Q9H3S3 457 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 GNG13Q9P2W3 67 aa6.03□□□□□ -1.44
SF3A1-208ENST00000485618 TENM3Q9P273 2699 aa6.02□□□□□ -1.44
SF3A1-208ENST00000485618 RYR1P21817 5038 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 IGKV2-40A0A087WW87 121 aaPredicted RBP6.02□□□□□ -1.45
SF3A1-208ENST00000485618 C7orf71A4D174 169 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 PEX7O00628 323 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 PDE6DO43924 150 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 PAGE4O60829 102 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 EIF3GO75821 320 aaKnown RBP eCLIP6.02□□□□□ -1.45
SF3A1-208ENST00000485618 IGKV2D-40P01614 121 aaPredicted RBP6.02□□□□□ -1.45
SF3A1-208ENST00000485618 GIG44P09565 113 aaPredicted RBP6.02□□□□□ -1.45
SF3A1-208ENST00000485618 CRISP2P16562 243 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 RNASE4P34096 147 aaKnown RBP6.02□□□□□ -1.45
SF3A1-208ENST00000485618 TAS2R60P59551 318 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 UBE2G1P62253 170 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 ERCC8Q13216 396 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 ALKAL2Q6UX46 152 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 ZNF705AQ6ZN79 300 aaPredicted RBP6.02□□□□□ -1.45
SF3A1-208ENST00000485618 ZNF493Q6ZR52 646 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 SSX7Q7RTT5 188 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 CSNK1G2-AS1Q8NCQ2 148 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 FMC1Q96HJ9 113 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 VGLL1Q99990 258 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 PYGO2Q9BRQ0 406 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 C11orf68Q9H3H3 251 aaKnown RBP6.02□□□□□ -1.45
SF3A1-208ENST00000485618 TREM1Q9NP99 234 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 ZFP30Q9Y2G7 519 aa6.02□□□□□ -1.45
SF3A1-208ENST00000485618 TRAV12-2A0A075B6T6 113 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 A0A1B0GV50 99 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 GGTLC3B5MD39 225 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 C11orf94C9JXX5 98 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 RGS13O14921 159 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 TMEM75Q8N9X5 138 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 RETNQ9HD89 108 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 VAX2Q9UIW0 290 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 PSG8Q9UQ74 426 aa6.01□□□□□ -1.45
SF3A1-208ENST00000485618 YTHDF2Q9Y5A9 579 aaKnown RBP6.01□□□□□ -1.45
SF3A1-208ENST00000485618 TRAV12-3A0A0B4J271 114 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 TRAV21A0A0B4J279 112 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 CXorf65A6NEN9 183 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 KLLNB2CW77 178 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 SPART-AS1P0CW21 52 aa6□□□□□ -1.45
SF3A1-208ENST00000485618 HTN1P15515 57 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms