RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 BAXQ07812 192 aa9.47□□□□□ -0.89
SMARCD3-211ENST00000485592 Q5BKY6 102 aa9.47□□□□□ -0.89
SMARCD3-211ENST00000485592 LINC00305Q7Z4B0 112 aa9.47□□□□□ -0.89
SMARCD3-211ENST00000485592 ZNF546Q86UE3 836 aa9.47□□□□□ -0.89
SMARCD3-211ENST00000485592 TMPRSS5Q9H3S3 457 aa9.47□□□□□ -0.89
SMARCD3-211ENST00000485592 J3KRW8 73 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 SNRPCP09234 159 aaKnown RBP9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 PET100P0DJ07 73 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 LEPP41159 167 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 CAMLGP49069 296 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 ERVFC1-1P60608 527 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 OPCMLQ14982 345 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 MORN5Q5VZ52 161 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 MIC13Q5XKP0 118 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 CHAC2Q8WUX2 184 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 TMEM37Q8WXS4 190 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 PYGO2Q9BRQ0 406 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 SLC25A31Q9H0C2 315 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 PXMP4Q9Y6I8 212 aa9.46□□□□□ -0.9
SMARCD3-211ENST00000485592 TRGV2A0A075B6R0 118 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 A0A096LPF7 62 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 TRAV12-3A0A0B4J271 114 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 SIVA1O15304 175 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 COX7A2P2O60397 106 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 GIPP09681 153 aaPredicted RBP9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 INAFM2P0DMQ5 153 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 ATP6V1FQ16864 119 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 CDPF1Q6NVV7 123 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 Q6ZTI0 123 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 THAP6Q8TBB0 222 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 ODF3Q96PU9 254 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 HSPB11Q9Y547 144 aa9.45□□□□□ -0.9
SMARCD3-211ENST00000485592 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
SMARCD3-211ENST00000485592 SLC17A3O00476 420 aa9.44□□□□□ -0.9
SMARCD3-211ENST00000485592 FGF7P21781 194 aa9.44□□□□□ -0.9
SMARCD3-211ENST00000485592 RPL29P47914 159 aaKnown RBP9.44□□□□□ -0.9
SMARCD3-211ENST00000485592 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
SMARCD3-211ENST00000485592 ZNF680Q8NEM1 530 aa9.44□□□□□ -0.9
SMARCD3-211ENST00000485592 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
SMARCD3-211ENST00000485592 H3BTX0 84 aa9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 RPL12P30050 165 aaKnown RBP9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 C10orf113Q5VZT2 155 aa9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 LYPD1Q8N2G4 141 aa9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 FRZBQ92765 325 aa9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 VSIG2Q96IQ7 327 aa9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 ATP5SQ99766 215 aa9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 WDR61Q9GZS3 305 aaKnown RBP9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 SLC39A9Q9NUM3 307 aa9.43□□□□□ -0.9
SMARCD3-211ENST00000485592 NPIPB6E9PJ23 425 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 IFNA5P01569 189 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 SLC25A5P05141 298 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 IGLC2P0DOY2 106 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 GUK1Q16774 197 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 GCSAMLQ5JQS6 135 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 Q5VSD8 79 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 ASB13Q8WXK3 278 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 C18orf15Q96N68 181 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 SMIM3Q9BZL3 60 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
SMARCD3-211ENST00000485592 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 RNF222A6NCQ9 220 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 MPDU1O75352 247 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 NXPH4O95158 308 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 RAB31Q13636 194 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 SAT2Q96F10 170 aaPredicted RBP9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 AQP10Q96PS8 301 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 GSN-AS1Q9NRJ2 163 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 FUT9Q9Y231 359 aa9.41□□□□□ -0.9
SMARCD3-211ENST00000485592 C7orf71A4D174 169 aa9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 H3BQ15 152 aa9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 PAX4O43316 350 aa9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 XGP55808 180 aa9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 Q6ZRG5 221 aa9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 EIF4E3Q8N5X7 224 aaKnown RBP9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 C11orf72Q8NBR9 251 aa9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 OR2T35Q8NGX2 323 aa9.4□□□□□ -0.9
SMARCD3-211ENST00000485592 TRAV5A0A0B4J249 113 aa9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 ZNF253O75346 499 aa9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 ZNF324O75467 553 aaPredicted RBP9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 ANXA2RQ3ZCQ2 193 aa9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 OR1L4Q8NGR5 311 aa9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 MRPL53Q96EL3 112 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 DNAJC4Q9NNZ3 241 aa9.39□□□□□ -0.91
SMARCD3-211ENST00000485592 TRAV9-2A0A087WT02 112 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 SMLR1H3BR10 107 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 SPINK4O60575 86 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 TCL1AP56279 114 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 SLAQ13239 276 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 ST6GAL2Q96JF0 529 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 PFDN5Q99471 154 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 TNFSF18Q9UNG2 199 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 HERC1Q15751 4861 aa9.38□□□□□ -0.91
SMARCD3-211ENST00000485592 A0A087WTM6 91 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms