RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	SNURFL	B1AK76	121 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	EPM2A	B3EWF7	344 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550		M0R3E3	92 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	INAFM2	P0DMQ5	153 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	S100A11	P31949	105 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	RPL29	P47914	159 aa	Known RBP	7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	SULT1A1	P50225	295 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	ERCC8	Q13216	396 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	TMEM252	Q8N6L7	170 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	C20orf144	Q9BQM9	153 aa		7.36	□□□□□ -1.23
HMGN1-215	ENST00000485550	FAM240B	A0A1B0GVZ2	78 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	RLN2	P04090	185 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	PYY	P10082	97 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	HOXA5	P20719	270 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	FGF7	P21781	194 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	LEP	P41159	167 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	IL15RA	Q13261	267 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	GUK1	Q16774	197 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	VWC2	Q2TAL6	325 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	GCSAML	Q5JQS6	135 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	STX12	Q86Y82	276 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	C6orf223	Q8N319	242 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	BLNK	Q8WV28	456 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	PFDN5	Q99471	154 aa		7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	GPN1	Q9HCN4	374 aa	Predicted RBP	7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	LYRM2	Q9NU23	88 aa	Predicted RBP	7.35	□□□□□ -1.23
HMGN1-215	ENST00000485550	TRBV19	A0A075B6N1	114 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	NPIPB6	E9PJ23	425 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	SIX6	O95475	246 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	M6PR	P20645	277 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	NHLH2	Q02577	135 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550		Q6ZTI0	123 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	EXOC3-AS1	Q8N2X6	119 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	LINC00612	Q8N6U2	182 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550		Q9H8V8	135 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	GSN-AS1	Q9NRJ2	163 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	TIMM9	Q9Y5J7	89 aa		7.34	□□□□□ -1.23
HMGN1-215	ENST00000485550	NDUFB4	O95168	129 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	HIST1H1E	P10412	219 aa	Known RBP	7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	RNASE4	P34096	147 aa	Known RBP	7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	HBG1	P69891	147 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	HBG2	P69892	147 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	CD300C	Q08708	224 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	BTN1A1	Q13410	526 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	ESRG	Q1W209	222 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	THAP6	Q8TBB0	222 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	RXFP4	Q8TDU9	374 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	PYGO2	Q9BRQ0	406 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	CCDC32	Q9BV29	185 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	AGPAT4-IT1	Q9H0P7	198 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	TMPRSS5	Q9H3S3	457 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	NDUFA13	Q9P0J0	144 aa		7.33	□□□□□ -1.24
HMGN1-215	ENST00000485550	TRGV2	A0A075B6R0	118 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	C7orf71	A4D174	169 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	ZNF253	O75346	499 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	IGKV2D-40	P01614	121 aa	Predicted RBP	7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	SLC25A5	P05141	298 aa	Known RBP	7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	KRTAP10-2	P60368	255 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	ICAM4	Q14773	271 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	ATP6V1F	Q16864	119 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	LRRC37A5P	Q49AS3	106 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	CDPF1	Q6NVV7	123 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	MZT2B	Q6NZ67	158 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	FAM122C	Q6P4D5	195 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550		Q6ZQT7	251 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	MIR17HG	Q75NE6	70 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	ODF3	Q96PU9	254 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	NPCDR1	Q9BY65	106 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	TMEM14C	Q9P0S9	112 aa		7.32	□□□□□ -1.24
HMGN1-215	ENST00000485550	SRRM2	Q9UQ35	2752 aa	Known RBP	7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	TRGV1	A0A0A0MS02	117 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	ZNF324	O75467	553 aa	Predicted RBP	7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	GPX1	P07203	203 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	DAZ2	Q13117	558 aa	Known RBP	7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	OR5C1	Q8NGR4	320 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	CHAC2	Q8WUX2	184 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	MRPL53	Q96EL3	112 aa	Known RBP	7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	LINC00477	Q96M19	166 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	VGLL1	Q99990	258 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	SLC25A2	Q9BXI2	301 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	KRTAP1-5	Q9BYS1	174 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	PRELID1	Q9Y255	219 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	KLF12	Q9Y4X4	402 aa		7.31	□□□□□ -1.24
HMGN1-215	ENST00000485550	IGHV3-53	P01767	116 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	NBEAP1	P0C6P0	100 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	PRR9	Q5T870	116 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	EIF4E3	Q8N5X7	224 aa	Known RBP	7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	C11orf72	Q8NBR9	251 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	VSIG2	Q96IQ7	327 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	FAM167A-AS1	Q96KT0	104 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	AAMDC	Q9H7C9	122 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	OR5AC2	Q9NZP5	309 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	TP53TG3	Q9ULZ0	132 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	FUT9	Q9Y231	359 aa		7.3	□□□□□ -1.24
HMGN1-215	ENST00000485550	MYCBP2	O75592	4640 aa		7.29	□□□□□ -1.24
HMGN1-215	ENST00000485550	FAT1	Q14517	4588 aa		7.29	□□□□□ -1.24
HMGN1-215	ENST00000485550	KLLN	B2CW77	178 aa		7.29	□□□□□ -1.24
HMGN1-215	ENST00000485550		H0YIZ8	118 aa		7.29	□□□□□ -1.24

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