RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
SREBF1-213ENST00000485080 SEC11BP0C7V7 166 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 GCHFRP30047 84 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 EIF5AP63241 154 aaKnown RBP12.77□□□□□ -0.37
SREBF1-213ENST00000485080 RRN3P1Q2M238 152 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 FAM74A1Q5RGS3 127 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 AKR1C8PQ5T2L2 129 aa12.77□□□□□ -0.37
SREBF1-213ENST00000485080 CXorf65A6NEN9 183 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 KLLNB2CW77 178 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 DIRC3C9JPN6 131 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 C1QBP02746 253 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 TAS2R60P59551 318 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 ERCC8Q13216 396 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-213ENST00000485080 TMUB2Q71RG4 321 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 TMED6Q8WW62 240 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 ZNF492Q9P255 531 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 ALMS1Q8TCU4 4167 aa12.76□□□□□ -0.37
SREBF1-213ENST00000485080 IGKV2-40A0A087WW87 121 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-213ENST00000485080 TEX48A0A1B0GUV7 120 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 LOC102723971A0A1B0GUV8 181 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 PGPA6NDG6 321 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 UMAD1C9J7I0 102 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 H7BYZ3 331 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 IGKV2D-40P01614 121 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-213ENST00000485080 NANOS2P60321 138 aaKnown RBP12.75□□□□□ -0.37
SREBF1-213ENST00000485080 SSX7Q7RTT5 188 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 STOML3Q8TAV4 291 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 HYLS1Q96M11 299 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 VGLL1Q99990 258 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 ZNF471Q9BX82 626 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-213ENST00000485080 LENEPQ9Y5L5 61 aa12.75□□□□□ -0.37
SREBF1-213ENST00000485080 ZNF138P52744 262 aa12.74□□□□□ -0.37
SREBF1-213ENST00000485080 KIR3DS1Q14943 382 aa12.74□□□□□ -0.37
SREBF1-213ENST00000485080 AKAP14Q86UN6 197 aa12.74□□□□□ -0.37
SREBF1-213ENST00000485080 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
SREBF1-213ENST00000485080 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-213ENST00000485080 LINC01587Q99440 93 aa12.74□□□□□ -0.37
SREBF1-213ENST00000485080 RYR3Q15413 4870 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 C11orf94C9JXX5 98 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 PFDN1O60925 122 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 SPART-AS1P0CW21 52 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 PMS2P11Q13670 270 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 LGALSLQ3ZCW2 172 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-213ENST00000485080 ZNF493Q6ZR52 646 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 ZFAND2AQ8N6M9 145 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 DKK2Q9UBU2 259 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 CELA1Q9UNI1 258 aa12.73□□□□□ -0.37
SREBF1-213ENST00000485080 SERTM2A0A1B0GWG4 89 aa12.72□□□□□ -0.37
SREBF1-213ENST00000485080 A0A1W2PRE2 83 aa12.72□□□□□ -0.37
SREBF1-213ENST00000485080 ZNF705GA8MUZ8 300 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-213ENST00000485080 TPT1P13693 172 aaKnown RBP12.72□□□□□ -0.37
SREBF1-213ENST00000485080 C12orf74Q32Q52 190 aa12.72□□□□□ -0.37
SREBF1-213ENST00000485080 DPPA3Q6W0C5 159 aa12.72□□□□□ -0.37
SREBF1-213ENST00000485080 C5orf17Q8NAS9 161 aa12.72□□□□□ -0.37
SREBF1-213ENST00000485080 LINC00467Q9BRT7 94 aa12.72□□□□□ -0.37
SREBF1-213ENST00000485080 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
SREBF1-213ENST00000485080 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-213ENST00000485080 C7orf71A4D174 169 aa12.71□□□□□ -0.37
SREBF1-213ENST00000485080 ZNF324O75467 553 aaPredicted RBP12.71□□□□□ -0.37
SREBF1-213ENST00000485080 PYGO2Q9BRQ0 406 aa12.71□□□□□ -0.37
SREBF1-213ENST00000485080 NIPSNAP3BQ9BS92 247 aa12.71□□□□□ -0.37
SREBF1-213ENST00000485080 YTHDF2Q9Y5A9 579 aaKnown RBP12.71□□□□□ -0.37
SREBF1-213ENST00000485080 PLAC8L1A1L4L8 177 aa12.7□□□□□ -0.38
SREBF1-213ENST00000485080 AZU1P20160 251 aa12.7□□□□□ -0.38
SREBF1-213ENST00000485080 TMEM263Q8WUH6 116 aaKnown RBP12.7□□□□□ -0.38
SREBF1-213ENST00000485080 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
SREBF1-213ENST00000485080 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
SREBF1-213ENST00000485080 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
SREBF1-213ENST00000485080 RYR2Q92736 4967 aa12.7□□□□□ -0.38
SREBF1-213ENST00000485080 hCG_2014768A0A024R1R8 64 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 TRAV12-3A0A0B4J271 114 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 MAP1LC3B2A6NCE7 125 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 LYRM9A8MSI8 78 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 GPX1P07203 203 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 EMP1P54849 157 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 CD300CQ08708 224 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 FAM222AQ5U5X8 452 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 Q6ZTC4 211 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 RNASE8Q8TDE3 154 aaKnown RBP12.69□□□□□ -0.38
SREBF1-213ENST00000485080 MAP1LC3BQ9GZQ8 125 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 VPS13DQ5THJ4 4388 aa12.69□□□□□ -0.38
SREBF1-213ENST00000485080 TRAV10A0A0B4J240 114 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 FBLL1A6NHQ2 334 aaKnown RBP12.68□□□□□ -0.38
SREBF1-213ENST00000485080 TCRAP04437 139 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 PRM2P04554 102 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 FHITP49789 147 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 TCTAP57738 103 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 SUMO1P63165 101 aaKnown RBP12.68□□□□□ -0.38
SREBF1-213ENST00000485080 EIF5AL1Q6IS14 154 aaKnown RBP12.68□□□□□ -0.38
SREBF1-213ENST00000485080 Q8TAT8 98 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 EPDR1Q9UM22 224 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
SREBF1-213ENST00000485080 LCE6AA0A183 80 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms