RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 EIF3GO75821 320 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF38-207ENST00000484621 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
RNF38-207ENST00000484621 RAB2AP61019 212 aa12.72□□□□□ -0.37
RNF38-207ENST00000484621 C16orf74Q96GX8 76 aa12.72□□□□□ -0.37
RNF38-207ENST00000484621 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
RNF38-207ENST00000484621 TRAV12-3A0A0B4J271 114 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 LYRM9A8MSI8 78 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 CSN1S1P47710 185 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 LYPD1Q8N2G4 141 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 AGPAT4-IT1Q9H0P7 198 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 Q9H3A6 140 aa12.71□□□□□ -0.37
RNF38-207ENST00000484621 ATP6V0CP27449 155 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 PQLC2Q6ZP29 291 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 C9orf47Q6ZRZ4 202 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 CCDC28AQ8IWP9 274 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 VGLL1Q99990 258 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 NDUFAF3Q9BU61 184 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 TNFSF18Q9UNG2 199 aa12.7□□□□□ -0.38
RNF38-207ENST00000484621 VPS13DQ5THJ4 4388 aa12.69□□□□□ -0.38
RNF38-207ENST00000484621 BORCS7-ASMTA0A0B4J1R7 106 aa12.69□□□□□ -0.38
RNF38-207ENST00000484621 C7orf71A4D174 169 aa12.69□□□□□ -0.38
RNF38-207ENST00000484621 RNF222A6NCQ9 220 aa12.69□□□□□ -0.38
RNF38-207ENST00000484621 SLC25A5P05141 298 aaKnown RBP12.69□□□□□ -0.38
RNF38-207ENST00000484621 DEFB130BP0DP73 79 aa12.69□□□□□ -0.38
RNF38-207ENST00000484621 DEFB130AP0DP74 79 aa12.69□□□□□ -0.38
RNF38-207ENST00000484621 OR2G3Q8NGZ4 309 aa12.69□□□□□ -0.38
RNF38-207ENST00000484621 TMEM263Q8WUH6 116 aaKnown RBP12.69□□□□□ -0.38
RNF38-207ENST00000484621 PSMG3Q9BT73 122 aaPredicted RBP12.69□□□□□ -0.38
RNF38-207ENST00000484621 TIMM8BQ9Y5J9 83 aaPredicted RBP12.69□□□□□ -0.38
RNF38-207ENST00000484621 PLAC8L1A1L4L8 177 aa12.68□□□□□ -0.38
RNF38-207ENST00000484621 HMGB3O15347 200 aaKnown RBP12.68□□□□□ -0.38
RNF38-207ENST00000484621 GPX1P07203 203 aa12.68□□□□□ -0.38
RNF38-207ENST00000484621 CDC34P49427 236 aaPredicted RBP12.68□□□□□ -0.38
RNF38-207ENST00000484621 RNASE8Q8TDE3 154 aaKnown RBP12.68□□□□□ -0.38
RNF38-207ENST00000484621 MBP02144 154 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
RNF38-207ENST00000484621 SERF2P84101 59 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 BTN1A1Q13410 526 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 RPL7L1Q6DKI1 246 aaKnown RBP12.67□□□□□ -0.38
RNF38-207ENST00000484621 FAM19A4Q96LR4 140 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 HYLS1Q96M11 299 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 PYGO2Q9BRQ0 406 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 SH3BGRL3Q9H299 93 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 NOP10Q9NPE3 64 aaKnown RBP12.67□□□□□ -0.38
RNF38-207ENST00000484621 OTORQ9NRC9 128 aa12.67□□□□□ -0.38
RNF38-207ENST00000484621 DNAH6Q9C0G6 4158 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 KLLNB2CW77 178 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 CRISP2P16562 243 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 ZNF138P52744 262 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 CD300CQ08708 224 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 FAM74A1Q5RGS3 127 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 CMTM2Q8TAZ6 248 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 RXFP4Q8TDU9 374 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 GNPNAT1Q96EK6 184 aaPredicted RBP12.66□□□□□ -0.38
RNF38-207ENST00000484621 FAM210BQ96KR6 192 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 ZNF492Q9P255 531 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 RPH3ALQ9UNE2 315 aa12.66□□□□□ -0.38
RNF38-207ENST00000484621 RBAKDNA6NC62 111 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 PGPA6NDG6 321 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 SNURFLB1AK76 121 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 DIRC3C9JPN6 131 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 G3V3Q6 166 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 ARPC5O15511 151 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 ARL14EPLP0DKL9 152 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 Q8TAT8 98 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 RAB24Q969Q5 203 aa12.65□□□□□ -0.38
RNF38-207ENST00000484621 DYNC1H1Q14204 4646 aaKnown RBP12.65□□□□□ -0.38
RNF38-207ENST00000484621 NMBP08949 121 aa12.64□□□□□ -0.39
RNF38-207ENST00000484621 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
RNF38-207ENST00000484621 SMLR1H3BR10 107 aa12.63□□□□□ -0.39
RNF38-207ENST00000484621 ZNF324O75467 553 aaPredicted RBP12.63□□□□□ -0.39
RNF38-207ENST00000484621 STAG3L2P0CL84 134 aa12.63□□□□□ -0.39
RNF38-207ENST00000484621 STAG3L3P0CL85 134 aa12.63□□□□□ -0.39
RNF38-207ENST00000484621 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
RNF38-207ENST00000484621 ACTR3CQ9C0K3 210 aaPredicted RBP12.63□□□□□ -0.39
RNF38-207ENST00000484621 TRBV7-9A0A0J9YWB2 115 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 CBY3A6NI87 242 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 F5H768 121 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 TAAR5O14804 337 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 ATP5G1P05496 136 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 P0DMU3 169 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 FAM231AP0DMU4 169 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 FAM231CP0DMU5 169 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 GCHFRP30047 84 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 ATP5G3P48201 142 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 PRR9Q5T870 116 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 KRTAP4-5Q9BYR2 181 aa12.62□□□□□ -0.39
RNF38-207ENST00000484621 RGS13O14921 159 aa12.61□□□□□ -0.39
RNF38-207ENST00000484621 CXorf1O96002 111 aa12.61□□□□□ -0.39
RNF38-207ENST00000484621 GOLT1AQ6ZVE7 132 aa12.61□□□□□ -0.39
RNF38-207ENST00000484621 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
RNF38-207ENST00000484621 EIF4E3Q8N5X7 224 aaKnown RBP12.61□□□□□ -0.39
RNF38-207ENST00000484621 ZNF680Q8NEM1 530 aa12.61□□□□□ -0.39
RNF38-207ENST00000484621 GAGE12BA1L429 117 aa12.6□□□□□ -0.39
RNF38-207ENST00000484621 GAGE7O76087 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms