RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CCSO14618 274 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 UPK1BO75841 260 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 CST7O76096 145 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 LEPP41159 167 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 FXYD7P58549 80 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 ARL16Q0P5N6 197 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 IL15RAQ13261 267 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 SPINK13Q1W4C9 94 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 SOHLH1Q5JUK2 328 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 PATE2Q6UY27 113 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 ZNF575Q86XF7 245 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 C1orf158Q8N1D5 194 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 RPP25LQ8N5L8 163 aaKnown RBP4.39□□□□□ -1.71
PTCD3-215ENST00000484203 RNF182Q8N6D2 247 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 DAZAP1Q96EP5 407 aaKnown RBP4.39□□□□□ -1.71
PTCD3-215ENST00000484203 C17orf77Q96MU5 243 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 MGST2Q99735 147 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 TMEM14CQ9P0S9 112 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 CELA1Q9UNI1 258 aa4.39□□□□□ -1.71
PTCD3-215ENST00000484203 TIMM8BQ9Y5J9 83 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-215ENST00000484203 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 UBE2L5PA0A1B0GUS4 154 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 FAM24AA6NFZ4 105 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 CBY3A6NI87 242 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 INMT-MINDY4F8WBC2 141 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 M0R2Z0 102 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 MRPS12O15235 138 aaKnown RBP4.38□□□□□ -1.71
PTCD3-215ENST00000484203 CCNKO75909 580 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 ATP5G1P05496 136 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 NMBP08949 121 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 IGLC2P0DOY2 106 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 HIST1H1EP10412 219 aaKnown RBP4.38□□□□□ -1.71
PTCD3-215ENST00000484203 FGF7P21781 194 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 ATP5G3P48201 142 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 DEFB1P60022 68 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 OPCMLQ14982 345 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 UBE2DNLQ8IWF7 75 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 TMEM263Q8WUH6 116 aaKnown RBP4.38□□□□□ -1.71
PTCD3-215ENST00000484203 TMEM37Q8WXS4 190 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 LINC00477Q96M19 166 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 MARVELD1Q9BSK0 173 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 C11orf1Q9H5F2 150 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 AAMDCQ9H7C9 122 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 TIMM9Q9Y5J7 89 aa4.38□□□□□ -1.71
PTCD3-215ENST00000484203 TRBV19A0A075B6N1 114 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 TRBV7-9A0A0J9YWB2 115 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 ZNF705GA8MUZ8 300 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-215ENST00000484203 CRXO43186 299 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-215ENST00000484203 SSNA1O43805 119 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 IFNA5P01569 189 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 SLC25A5P05141 298 aaKnown RBP4.37□□□□□ -1.71
PTCD3-215ENST00000484203 CSN1S1P47710 185 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 TAS2R45P59539 299 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 LGALS9BQ3B8N2 356 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 MIC13Q5XKP0 118 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 BAP18Q8IXM2 172 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 LYPD1Q8N2G4 141 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 ZNF680Q8NEM1 530 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 OR5C1Q8NGR4 320 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 SAT2Q96F10 170 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-215ENST00000484203 PYGO2Q9BRQ0 406 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 NPCDR1Q9BY65 106 aa4.37□□□□□ -1.71
PTCD3-215ENST00000484203 MRPL32Q9BYC8 188 aaKnown RBP4.37□□□□□ -1.71
PTCD3-215ENST00000484203 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
PTCD3-215ENST00000484203 KMT2AQ03164 3969 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 TRAV12-2A0A075B6T6 113 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 IGSF23A1L1A6 192 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 SNURFLB1AK76 121 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 H3BQ15 152 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 DEFB130BP0DP73 79 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 DEFB130AP0DP74 79 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 HTN1P15515 57 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 HTN3P15516 51 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 CCL18P55774 89 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 ZNF767PQ75MW2 155 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 SCGB1C1Q8TD33 95 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 ASB13Q8WXK3 278 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 ATP5SQ99766 215 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 LINC00467Q9BRT7 94 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 ATG101Q9BSB4 218 aa4.36□□□□□ -1.71
PTCD3-215ENST00000484203 HYDINQ4G0P3 5121 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 F5H768 121 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 H3BNG1 76 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 NBEAP1P0C6P0 100 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 DAZ2Q13117 558 aaKnown RBP4.35□□□□□ -1.71
PTCD3-215ENST00000484203 FAM74A1Q5RGS3 127 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 TMEM78Q5T7P6 136 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 TMEM88Q6PEY1 159 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 ARL6IP6Q8N6S5 226 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 RNASE8Q8TDE3 154 aaKnown RBP4.35□□□□□ -1.71
PTCD3-215ENST00000484203 RXFP4Q8TDU9 374 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 PPP1R1CQ8WVI7 109 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 PARD6GQ9BYG4 376 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-215ENST00000484203 WDR61Q9GZS3 305 aaKnown RBP4.35□□□□□ -1.71
PTCD3-215ENST00000484203 OR51M1Q9H341 326 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 ZNF586Q9NXT0 402 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 FUT9Q9Y231 359 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
PTCD3-215ENST00000484203 TRAV5A0A0B4J249 113 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms