RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 DIP2AQ14689 1571 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 CASKIN1Q8WXD9 1431 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.95□□□□□ -2.1
MCF2-207ENST00000483690 A0A087WSZ3 146 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 H0YJX3 145 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 PGRMC1O00264 195 aaKnown RBP1.95□□□□□ -2.1
MCF2-207ENST00000483690 HIST1H2BKO60814 126 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 HIST1H2BJP06899 126 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 GLRXP35754 106 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 KLRD1Q13241 179 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 C1orf140Q5VVS0 124 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 LINC00322Q6ZN03 302 aaPredicted RBP1.95□□□□□ -2.1
MCF2-207ENST00000483690 TEN1Q86WV5 123 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 OR52A1Q9UKL2 312 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 CASP8AP2Q9UKL3 1982 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 ITSN2Q9NZM3 1697 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 DLC1Q96QB1 1528 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 SYCP2Q9BX26 1530 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 KIDINS220Q9ULH0 1771 aa1.95□□□□□ -2.1
MCF2-207ENST00000483690 CDC42BPAQ5VT25 1732 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 TIAM1Q13009 1591 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 SAMD9LQ8IVG5 1584 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 CLIP1P30622 1438 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 EEA1Q15075 1411 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 OR2T8A6NH00 312 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 K7ERJ3 54 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 RER1O15258 196 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 CXCL8P10145 99 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 TAC4Q86UU9 113 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 FAM24BQ8N5W8 94 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 DYDC1Q8WWB3 177 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 HYLS1Q96M11 299 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 GGACTQ9BVM4 153 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 C19orf12Q9NSK7 152 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 ASXL1Q8IXJ9 1541 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 CCNB3Q8WWL7 1395 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 MYO5CQ9NQX4 1742 aa1.94□□□□□ -2.1
MCF2-207ENST00000483690 NRKQ7Z2Y5 1582 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 PREX2Q70Z35 1606 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 MROH1Q8NDA8 1641 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 F8W1H4 67 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 NDUFA2O43678 99 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 SMIM24O75264 130 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 PIAS1O75925 651 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 FABP1P07148 127 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 PSG9Q00887 426 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 LTC4SQ16873 150 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 RTL8BQ17RB0 113 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 CCDC58Q4VC31 144 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 FKBP1CQ5VVH2 108 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 Q8TAT8 98 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 V9GYQ6 96 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 MBD5Q9P267 1494 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 MAST1Q9Y2H9 1570 aa1.93□□□□□ -2.1
MCF2-207ENST00000483690 SNRNP200O75643 2136 aaKnown RBP1.93□□□□□ -2.1
MCF2-207ENST00000483690 SLIT1O75093 1534 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 XIRP1Q702N8 1843 aaKnown RBP1.92□□□□□ -2.1
MCF2-207ENST00000483690 MYLKQ15746 1914 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 ALPK3Q96L96 1907 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
MCF2-207ENST00000483690 EFCAB10A6NFE3 127 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 PPP5D1E7EU14 171 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 KRTAP26-1Q6PEX3 210 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 PYDC1Q8WXC3 89 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 RMND5BQ96G75 393 aaPredicted RBP1.92□□□□□ -2.1
MCF2-207ENST00000483690 AMELYQ99218 206 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 MED11Q9P086 117 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 LAMTOR3Q9UHA4 124 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 PLEKHH2Q8IVE3 1493 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 FYCO1Q9BQS8 1478 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 PLXNC1O60486 1568 aa1.92□□□□□ -2.1
MCF2-207ENST00000483690 KDM5AP29375 1690 aaKnown RBP1.92□□□□□ -2.1
MCF2-207ENST00000483690 N4BP2Q86UW6 1770 aaPredicted RBP1.92□□□□□ -2.1
MCF2-207ENST00000483690 CEP162Q5TB80 1403 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 YTHDC2Q9H6S0 1430 aaKnown RBP1.91□□□□□ -2.1
MCF2-207ENST00000483690 CHD3Q12873 2000 aaKnown RBP1.91□□□□□ -2.1
MCF2-207ENST00000483690 ZC3H13Q5T200 1668 aaKnown RBP1.91□□□□□ -2.1
MCF2-207ENST00000483690 ADGBQ8N7X0 1667 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 INO80Q9ULG1 1556 aaPredicted RBP1.91□□□□□ -2.1
MCF2-207ENST00000483690 MYOM2P54296 1465 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 ERVK-7P63135 1459 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 C1orf167Q5SNV9 1468 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 CCDC18Q5T9S5 1454 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 TRAV27A0A087WT01 109 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 H3BRM9 83 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 GPR31O00270 319 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 HBBP68871 147 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 GKN2Q86XP6 184 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.91□□□□□ -2.1
MCF2-207ENST00000483690 BATF3Q9NR55 127 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 GINS2Q9Y248 185 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 ASB4Q9Y574 426 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 ABCC5O15440 1437 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 KIAA1107Q9UPP5 1409 aa1.91□□□□□ -2.1
MCF2-207ENST00000483690 EP400Q96L91 3159 aa1.9□□□□□ -2.1
MCF2-207ENST00000483690 MYOM1P52179 1685 aa1.9□□□□□ -2.1
MCF2-207ENST00000483690 GNG14A0A1W2PPG7 69 aa1.9□□□□□ -2.11
MCF2-207ENST00000483690 MIF4GDA9UHW6 222 aaKnown RBP1.9□□□□□ -2.11
MCF2-207ENST00000483690 KLF7O75840 302 aaPredicted RBP1.9□□□□□ -2.11
MCF2-207ENST00000483690 SMIM15Q7Z3B0 74 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 405.9 ms