RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, human

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP40-206	ENST00000483546	CT45A10	P0DMU9	189 aa		11.26	□□□□□ -0.61
RPP40-206	ENST00000483546	RRN3P1	Q2M238	152 aa		11.26	□□□□□ -0.61
RPP40-206	ENST00000483546	BAP18	Q8IXM2	172 aa		11.26	□□□□□ -0.61
RPP40-206	ENST00000483546	AGPAT4-IT1	Q9H0P7	198 aa		11.26	□□□□□ -0.61
RPP40-206	ENST00000483546	TRAV12-2	A0A075B6T6	113 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	SERTM2	A0A1B0GWG4	89 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	PGP	A6NDG6	321 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	DIRC3	C9JPN6	131 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546		H7BYZ3	331 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	CRISP2	P16562	243 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	ZNF726P1	Q15940	193 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	EIF5AL1	Q6IS14	154 aa	Known RBP	11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	DPPA3	Q6W0C5	159 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	TMED6	Q8WW62	240 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	FAM19A4	Q96LR4	140 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	ZNF492	Q9P255	531 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	LENEP	Q9Y5L5	61 aa		11.25	□□□□□ -0.61
RPP40-206	ENST00000483546	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.24	□□□□□ -0.61
RPP40-206	ENST00000483546		A0A1W2PRE2	83 aa		11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	NUPR2	A6NF83	97 aa		11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	KLLN	B2CW77	178 aa		11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	DEFB4A	O15263	64 aa		11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	IGKV2D-40	P01614	121 aa	Predicted RBP	11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	ZNF138	P52744	262 aa		11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	TAS2R60	P59551	318 aa		11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	C5orf17	Q8NAS9	161 aa		11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	NKX6-2	Q9C056	277 aa	Predicted RBP	11.24	□□□□□ -0.61
RPP40-206	ENST00000483546	LOC102723971	A0A1B0GUV8	181 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	MAP1LC3B2	A6NCE7	125 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	CXorf65	A6NEN9	183 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	PRB4	P10163	310 aa	Predicted RBP	11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	ERCC8	Q13216	396 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	GFI1B	Q5VTD9	330 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	ZFAND6	Q6FIF0	208 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	SSX7	Q7RTT5	188 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	LINC01587	Q99440	93 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	VGLL1	Q99990	258 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	MAP1LC3B	Q9GZQ8	125 aa		11.23	□□□□□ -0.61
RPP40-206	ENST00000483546	C11orf94	C9JXX5	98 aa		11.22	□□□□□ -0.61
RPP40-206	ENST00000483546		K7EQM0	130 aa		11.22	□□□□□ -0.61
RPP40-206	ENST00000483546	RAB5C	P51148	216 aa		11.22	□□□□□ -0.61
RPP40-206	ENST00000483546	ZFP69	Q49AA0	526 aa		11.22	□□□□□ -0.61
RPP40-206	ENST00000483546	ZNF493	Q6ZR52	646 aa		11.22	□□□□□ -0.61
RPP40-206	ENST00000483546	IQCF2	Q8IXL9	164 aa		11.22	□□□□□ -0.61
RPP40-206	ENST00000483546	NIPSNAP3B	Q9BS92	247 aa		11.22	□□□□□ -0.61
RPP40-206	ENST00000483546	C7orf71	A4D174	169 aa		11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	FBLL1	A6NHQ2	334 aa	Known RBP	11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	GPX1	P07203	203 aa		11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	SPART-AS1	P0CW21	52 aa		11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	SLC51B	Q86UW2	128 aa		11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	C16orf74	Q96GX8	76 aa		11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	PYGO2	Q9BRQ0	406 aa		11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	ARL2-SNX15	V9GYD0	113 aa		11.21	□□□□□ -0.61
RPP40-206	ENST00000483546	NANOS2	P60321	138 aa	Known RBP	11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	PMS2P11	Q13670	270 aa		11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	ZFAND2A	Q8N6M9	145 aa		11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	MBD3L1	Q8WWY6	194 aa		11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	LINC00467	Q9BRT7	94 aa		11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	KLK5	Q9Y337	293 aa	Predicted RBP	11.2	□□□□□ -0.62
RPP40-206	ENST00000483546	TRAV12-3	A0A0B4J271	114 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	GGTLC3	B5MD39	225 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	TCRA	P04437	139 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	SUMO1	P63165	101 aa	Known RBP	11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	KIR3DS1	Q14943	382 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	GOLT1A	Q6ZVE7	132 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	CCDC28A	Q8IWP9	274 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	FAM213B	Q8TBF2	198 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	TMEM263	Q8WUH6	116 aa	Known RBP	11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	TCEAL7	Q9BRU2	100 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	DKK2	Q9UBU2	259 aa		11.19	□□□□□ -0.62
RPP40-206	ENST00000483546	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.19	□□□□□ -0.62
RPP40-206	ENST00000483546		A0A1B0GVG6	124 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	LYRM9	A8MSI8	78 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546		J3KRW8	73 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	FHIT	P49789	147 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	PPT1	P50897	306 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	EMP1	P54849	157 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	FGF8	P55075	233 aa	Predicted RBP	11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	C9orf62	Q8N4C0	152 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	CYB561D1	Q8N8Q1	229 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546		Q8TAT8	98 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	ATG101	Q9BSB4	218 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	PLA2G2E	Q9NZK7	142 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	EPDR1	Q9UM22	224 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	RPH3AL	Q9UNE2	315 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	CELA1	Q9UNI1	258 aa		11.18	□□□□□ -0.62
RPP40-206	ENST00000483546	TRAV10	A0A0B4J240	114 aa		11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	FAM74A7	A6NL05	159 aa		11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	ZNF324	O75467	553 aa	Predicted RBP	11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	H2AFB1	P0C5Y9	115 aa		11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	RNASE4	P34096	147 aa	Known RBP	11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	CD300C	Q08708	224 aa		11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	BTN1A1	Q13410	526 aa		11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	FAM222A	Q5U5X8	452 aa		11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	RNASE8	Q8TDE3	154 aa	Known RBP	11.17	□□□□□ -0.62
RPP40-206	ENST00000483546	SFT2D1	Q8WV19	159 aa		11.17	□□□□□ -0.62

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