RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SSX7Q7RTT5 188 aa11.71□□□□□ -0.53
COL2A1-206ENST00000483376 C11orf45Q8TAV5 145 aa11.71□□□□□ -0.53
COL2A1-206ENST00000483376 LENEPQ9Y5L5 61 aa11.71□□□□□ -0.53
COL2A1-206ENST00000483376 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 TEX48A0A1B0GUV7 120 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 PFDN1O60925 122 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 TPT1P13693 172 aaKnown RBP11.7□□□□□ -0.54
COL2A1-206ENST00000483376 TAS2R60P59551 318 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 LGALSLQ3ZCW2 172 aaPredicted RBP11.7□□□□□ -0.54
COL2A1-206ENST00000483376 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 TMEM208Q9BTX3 173 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 ZNF492Q9P255 531 aa11.7□□□□□ -0.54
COL2A1-206ENST00000483376 IGKV2-40A0A087WW87 121 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-206ENST00000483376 A0A1W2PRE2 83 aa11.69□□□□□ -0.54
COL2A1-206ENST00000483376 PGPA6NDG6 321 aa11.69□□□□□ -0.54
COL2A1-206ENST00000483376 H7BYZ3 331 aa11.69□□□□□ -0.54
COL2A1-206ENST00000483376 IGKV2D-40P01614 121 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-206ENST00000483376 GFI1BQ5VTD9 330 aa11.69□□□□□ -0.54
COL2A1-206ENST00000483376 CMTM2Q8TAZ6 248 aa11.69□□□□□ -0.54
COL2A1-206ENST00000483376 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 IGHV3OR16-12A0A075B7B8 117 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 DEFB4AO15263 64 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-206ENST00000483376 ZNF138P52744 262 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 ERCC8Q13216 396 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 VGLL1Q99990 258 aa11.68□□□□□ -0.54
COL2A1-206ENST00000483376 PLECQ15149 4684 aaKnown RBP11.67□□□□□ -0.54
COL2A1-206ENST00000483376 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 ZFAND6Q6FIF0 208 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 EIF5AL1Q6IS14 154 aaKnown RBP11.67□□□□□ -0.54
COL2A1-206ENST00000483376 SLC51BQ86UW2 128 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 ZFAND2AQ8N6M9 145 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 MBD3L1Q8WWY6 194 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 LINC00467Q9BRT7 94 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 NKX6-2Q9C056 277 aaPredicted RBP11.67□□□□□ -0.54
COL2A1-206ENST00000483376 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 ARL2-SNX15V9GYD0 113 aa11.67□□□□□ -0.54
COL2A1-206ENST00000483376 C7orf71A4D174 169 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 MAP1LC3B2A6NCE7 125 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 CXorf65A6NEN9 183 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 GGTLC3B5MD39 225 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 C11orf94C9JXX5 98 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 KIR3DS1Q14943 382 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 CEMP1Q6PRD7 247 aaPredicted RBP11.66□□□□□ -0.54
COL2A1-206ENST00000483376 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 LINC01587Q99440 93 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
COL2A1-206ENST00000483376 LYSTQ99698 3801 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.54
COL2A1-206ENST00000483376 ZNF324O75467 553 aaPredicted RBP11.65□□□□□ -0.54
COL2A1-206ENST00000483376 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 RAB5CP51148 216 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 NANOS2P60321 138 aaKnown RBP11.65□□□□□ -0.54
COL2A1-206ENST00000483376 PHLDA1Q8WV24 401 aaPredicted RBP11.65□□□□□ -0.54
COL2A1-206ENST00000483376 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 NIPSNAP3BQ9BS92 247 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 DKK2Q9UBU2 259 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 CELA1Q9UNI1 258 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 SACSQ9NZJ4 4579 aa11.65□□□□□ -0.54
COL2A1-206ENST00000483376 TENM2Q9NT68 2774 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 DNAH1Q9P2D7 4330 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 A0A1B0GVG6 124 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 PLAC8L1A1L4L8 177 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 TCRAP04437 139 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 FHITP49789 147 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 C9orf62Q8N4C0 152 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 RNASE8Q8TDE3 154 aaKnown RBP11.64□□□□□ -0.55
COL2A1-206ENST00000483376 TMEM263Q8WUH6 116 aaKnown RBP11.64□□□□□ -0.55
COL2A1-206ENST00000483376 TCEAL7Q9BRU2 100 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
COL2A1-206ENST00000483376 LYRM9A8MSI8 78 aa11.63□□□□□ -0.55
COL2A1-206ENST00000483376 ZNF705GA8MUZ8 300 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-206ENST00000483376 GPX1P07203 203 aa11.63□□□□□ -0.55
COL2A1-206ENST00000483376 SUMO1P63165 101 aaKnown RBP11.63□□□□□ -0.55
COL2A1-206ENST00000483376 CD300CQ08708 224 aa11.63□□□□□ -0.55
COL2A1-206ENST00000483376 PMS2P11Q13670 270 aa11.63□□□□□ -0.55
COL2A1-206ENST00000483376 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
COL2A1-206ENST00000483376 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-206ENST00000483376 YTHDF2Q9Y5A9 579 aaKnown RBP11.63□□□□□ -0.55
COL2A1-206ENST00000483376 TRAV12-3A0A0B4J271 114 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 FAM74A7A6NL05 159 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 K7EQM0 130 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 AZU1P20160 251 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
COL2A1-206ENST00000483376 C12orf74Q32Q52 190 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 FAM222AQ5U5X8 452 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 Q6AWC8 147 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 IQCF2Q8IXL9 164 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 CYB561D1Q8N8Q1 229 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 Q8TAT8 98 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 FAM213BQ8TBF2 198 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 ATG101Q9BSB4 218 aa11.62□□□□□ -0.55
COL2A1-206ENST00000483376 TMPRSS5Q9H3S3 457 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms