RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TRAV1-1A0A0B4J248 108 aa13.02□□□□□ -0.32
CPNE1-224ENST00000483359 UBE2CO00762 179 aa13.02□□□□□ -0.32
CPNE1-224ENST00000483359 CT45A10P0DMU9 189 aa13.02□□□□□ -0.32
CPNE1-224ENST00000483359 ZNF680Q8NEM1 530 aa13.02□□□□□ -0.32
CPNE1-224ENST00000483359 CLUHP3Q96NS8 147 aa13.02□□□□□ -0.32
CPNE1-224ENST00000483359 RCHY1Q96PM5 261 aa13.02□□□□□ -0.32
CPNE1-224ENST00000483359 TCRAP04437 139 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 BLOC1S1P78537 153 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 KIR3DS1Q14943 382 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 Q6ZWC4 215 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 TENM3Q9P273 2699 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 C1QTNF4Q9BXJ3 329 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 EPDR1Q9UM22 224 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 TGP01266 2768 aa13.01□□□□□ -0.33
CPNE1-224ENST00000483359 IGHV3OR16-12A0A075B7B8 117 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 OVOL2Q9BRP0 275 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 RBAKDNA6NC62 111 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 SPRY2O43597 315 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 CDKN1BP46527 198 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 PPT1P50897 306 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 RNF183Q96D59 192 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 LINC00477Q96M19 166 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
CPNE1-224ENST00000483359 MANBALQ9NQG1 85 aa13□□□□□ -0.33
CPNE1-224ENST00000483359 C11orf94C9JXX5 98 aa12.99□□□□□ -0.33
CPNE1-224ENST00000483359 CRXO43186 299 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-224ENST00000483359 CYB561D1Q8N8Q1 229 aa12.99□□□□□ -0.33
CPNE1-224ENST00000483359 CSNK1G2-AS1Q8NCQ2 148 aa12.99□□□□□ -0.33
CPNE1-224ENST00000483359 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
CPNE1-224ENST00000483359 ATG101Q9BSB4 218 aa12.99□□□□□ -0.33
CPNE1-224ENST00000483359 ZNF492Q9P255 531 aa12.99□□□□□ -0.33
CPNE1-224ENST00000483359 ARL2-SNX15V9GYD0 113 aa12.99□□□□□ -0.33
CPNE1-224ENST00000483359 PEX7O00628 323 aa12.98□□□□□ -0.33
CPNE1-224ENST00000483359 NHLRC4P0CG21 123 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-224ENST00000483359 ZNF138P52744 262 aa12.98□□□□□ -0.33
CPNE1-224ENST00000483359 CCDC28AQ8IWP9 274 aa12.98□□□□□ -0.33
CPNE1-224ENST00000483359 TRAV34A0A0B4J273 112 aa12.97□□□□□ -0.33
CPNE1-224ENST00000483359 K7EQM0 130 aa12.97□□□□□ -0.33
CPNE1-224ENST00000483359 INSP01308 110 aa12.97□□□□□ -0.33
CPNE1-224ENST00000483359 IFNA1P01562 189 aa12.97□□□□□ -0.33
CPNE1-224ENST00000483359 LEPP41159 167 aa12.97□□□□□ -0.33
CPNE1-224ENST00000483359 SCO2A0A1W2PP80 73 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 RBMY1A1P0DJD3 496 aaKnown RBP12.96□□□□□ -0.33
CPNE1-224ENST00000483359 RBMY1CP0DJD4 496 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 TSPOP30536 169 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 RBMY1FQ15415 496 aaKnown RBP12.96□□□□□ -0.33
CPNE1-224ENST00000483359 GFI1BQ5VTD9 330 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 ARL6IP6Q8N6S5 226 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 OR11H2Q8NH07 326 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 ODF3Q96PU9 254 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 RARRES2Q99969 163 aa12.96□□□□□ -0.33
CPNE1-224ENST00000483359 SERTM2A0A1B0GWG4 89 aa12.96□□□□□ -0.34
CPNE1-224ENST00000483359 BCL2P10415 239 aa12.96□□□□□ -0.34
CPNE1-224ENST00000483359 PRR9Q5T870 116 aa12.96□□□□□ -0.34
CPNE1-224ENST00000483359 HIST1H2BAQ96A08 127 aa12.96□□□□□ -0.34
CPNE1-224ENST00000483359 FAM19A4Q96LR4 140 aa12.96□□□□□ -0.34
CPNE1-224ENST00000483359 TMEM208Q9BTX3 173 aa12.96□□□□□ -0.34
CPNE1-224ENST00000483359 TP53TG1Q9Y2A0 90 aa12.96□□□□□ -0.34
CPNE1-224ENST00000483359 AMBPP02760 352 aa12.95□□□□□ -0.34
CPNE1-224ENST00000483359 BTN1A1Q13410 526 aa12.95□□□□□ -0.34
CPNE1-224ENST00000483359 PRNTQ86SH4 94 aa12.95□□□□□ -0.34
CPNE1-224ENST00000483359 C1orf158Q8N1D5 194 aa12.95□□□□□ -0.34
CPNE1-224ENST00000483359 LYPD6BQ8NI32 183 aa12.95□□□□□ -0.34
CPNE1-224ENST00000483359 TRAV12-3A0A0B4J271 114 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 IGLV2-11P01706 119 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 GPX1P07203 203 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 S100A1P23297 94 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 FLI1Q01543 452 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-224ENST00000483359 ZFAND2AQ8N6M9 145 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 PSG8Q9UQ74 426 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 U3KQK5 164 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 F6UZH7 168 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 RNASE4P34096 147 aaKnown RBP12.94□□□□□ -0.34
CPNE1-224ENST00000483359 AKR1C3P42330 323 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 MEF2BQ02080 365 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-224ENST00000483359 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
CPNE1-224ENST00000483359 NMBP08949 121 aa12.93□□□□□ -0.34
CPNE1-224ENST00000483359 HTN1P15515 57 aa12.93□□□□□ -0.34
CPNE1-224ENST00000483359 TVP23CQ96ET8 276 aa12.93□□□□□ -0.34
CPNE1-224ENST00000483359 X6R8D5 127 aa12.93□□□□□ -0.34
CPNE1-224ENST00000483359 KLLNB2CW77 178 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 DEFB4AO15263 64 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 PRM2P04554 102 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 CRISP2P16562 243 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 UBE2G1P62253 170 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-224ENST00000483359 Q6ZQT7 251 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 TCEAL7Q9BRU2 100 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 TREM1Q9NP99 234 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 LOC102723971A0A1B0GUV8 181 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 IFITM2Q01629 132 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 TOR2AQ5JU69 321 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 Q86TA4 180 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 C8orf49Q96NF6 230 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 NDFIP1Q9BT67 221 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 VAX2Q9UIW0 290 aa12.92□□□□□ -0.34
CPNE1-224ENST00000483359 C7orf71A4D174 169 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms