RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 H3BRN7 92 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 M0R1B8 84 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 FCN3O75636 299 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 ATP5LO75964 103 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 TNFAIP6P98066 277 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-205ENST00000483122 ZNF575Q86XF7 245 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 RASL11BQ9BPW5 248 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-205ENST00000483122 OR11H12B2RN74 326 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 MRPS12O15235 138 aaKnown RBP9.23□□□□□ -0.93
VTI1A-205ENST00000483122 IGKV1-17P01599 117 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-205ENST00000483122 GATA4P43694 442 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 ZNF80P51504 273 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-205ENST00000483122 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 OR11H1Q8NG94 326 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 OR11H2Q8NH07 326 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 ATP6V0E2Q8NHE4 81 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 SLC25A15Q9Y619 301 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 DCHS1Q96JQ0 3298 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 K7EM74 188 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 ATP1A1-AS1Q5TC04 95 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 TMEM200BQ69YZ2 307 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 PGPEP1Q9NXJ5 209 aa9.23□□□□□ -0.93
VTI1A-205ENST00000483122 NDUFA3O95167 84 aa9.22□□□□□ -0.93
VTI1A-205ENST00000483122 IGHV1-46P01743 117 aa9.22□□□□□ -0.93
VTI1A-205ENST00000483122 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
VTI1A-205ENST00000483122 CCL11P51671 97 aa9.22□□□□□ -0.93
VTI1A-205ENST00000483122 LYPD1Q8N2G4 141 aa9.22□□□□□ -0.93
VTI1A-205ENST00000483122 NXT2Q9NPJ8 142 aaKnown RBP9.22□□□□□ -0.93
VTI1A-205ENST00000483122 HOXA3O43365 443 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-205ENST00000483122 Q8TAT8 98 aa9.22□□□□□ -0.93
VTI1A-205ENST00000483122 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
VTI1A-205ENST00000483122 PRSS29PA6NIE9 313 aa9.21□□□□□ -0.93
VTI1A-205ENST00000483122 TEX22C9J3V5 150 aa9.21□□□□□ -0.93
VTI1A-205ENST00000483122 I3L2K1 104 aa9.21□□□□□ -0.93
VTI1A-205ENST00000483122 PSMB2P49721 201 aa9.21□□□□□ -0.93
VTI1A-205ENST00000483122 RPEQ96AT9 228 aa9.21□□□□□ -0.93
VTI1A-205ENST00000483122 SMG1Q96Q15 3661 aaKnown RBP9.21□□□□□ -0.94
VTI1A-205ENST00000483122 IGLV2-18A0A075B6J9 118 aa9.21□□□□□ -0.94
VTI1A-205ENST00000483122 GLRXP35754 106 aa9.21□□□□□ -0.94
VTI1A-205ENST00000483122 DLX4Q92988 240 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-205ENST00000483122 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
VTI1A-205ENST00000483122 SPTBN4Q9H254 2564 aa9.21□□□□□ -0.94
VTI1A-205ENST00000483122 CFAP161Q6P656 301 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 PRR25Q96S07 402 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 CTSZQ9UBR2 303 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 PROCRQ9UNN8 238 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 IGLV3-9A0A075B6K5 115 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 A0A087WX48 190 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 LINC01549A6NIU2 74 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 IL4P05112 153 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 CRYGBP07316 175 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 TEX36Q5VZQ5 186 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 Q6ZS92 163 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 ZNF491Q8N8L2 437 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 Q8N8P6 123 aa9.2□□□□□ -0.94
VTI1A-205ENST00000483122 NCBP2LA6PVI3 153 aaKnown RBP9.19□□□□□ -0.94
VTI1A-205ENST00000483122 CEACAM4O75871 244 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 WT1P19544 449 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-205ENST00000483122 EFNA4P52798 201 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 MYOZ3Q8TDC0 251 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 PSMG3-AS1Q96PY0 264 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 SIGLEC9Q9Y336 463 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 S4R3C0 116 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 LOC107984156A0A0G2JMH3 177 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 ORM1P02763 201 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 DLX1P56177 255 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 PRB3Q04118 309 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-205ENST00000483122 ARL17AQ8IVW1 177 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 LINC00311Q8N616 119 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 RNF125Q96EQ8 232 aa9.19□□□□□ -0.94
VTI1A-205ENST00000483122 B5MCH6 92 aa9.18□□□□□ -0.94
VTI1A-205ENST00000483122 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
VTI1A-205ENST00000483122 IGFL4Q6B9Z1 124 aa9.18□□□□□ -0.94
VTI1A-205ENST00000483122 PPDPFLQ8WWR9 84 aa9.18□□□□□ -0.94
VTI1A-205ENST00000483122 UFC1Q9Y3C8 167 aa9.18□□□□□ -0.94
VTI1A-205ENST00000483122 PLCE1Q9P212 2302 aa9.18□□□□□ -0.94
VTI1A-205ENST00000483122 FAM90A27PA6NNH2 459 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 LGALS1P09382 135 aaKnown RBP9.17□□□□□ -0.94
VTI1A-205ENST00000483122 CCL8P80075 99 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 GAGE5Q13069 117 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 GAGE6Q13070 117 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 PLGLAQ15195 96 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 DTX2Q86UW9 622 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 LINC01619G3V211 115 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 K7EIM0 57 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 TNFRSF13BO14836 293 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-205ENST00000483122 LYPD2Q6UXB3 125 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 COX8CQ7Z4L0 72 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 FBXL15Q9H469 300 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 RALYQ9UKM9 306 aaKnown RBP9.17□□□□□ -0.94
VTI1A-205ENST00000483122 CACNA1GO43497 2377 aa9.17□□□□□ -0.94
VTI1A-205ENST00000483122 IGHG3P01860 377 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 TRGV3P03979 118 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms