RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 C14orf144Q96I85 54 aa11.32□□□□□ -0.6
PHGDH-205ENST00000482968 C16orf92Q96LL3 132 aa11.32□□□□□ -0.6
PHGDH-205ENST00000482968 PYGO2Q9BRQ0 406 aa11.32□□□□□ -0.6
PHGDH-205ENST00000482968 ZNF331Q9NQX6 463 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-205ENST00000482968 PRB4P10163 310 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-205ENST00000482968 TAS2R60P59551 318 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 PSG9Q00887 426 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 HLA-DMBP28068 263 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 PAFAH1B2P68402 229 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
PHGDH-205ENST00000482968 TRAV8-2A0A0B4J237 113 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 IZUMO1RA6ND01 250 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 ZNF253O75346 499 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 SLC25A5P05141 298 aaKnown RBP11.3□□□□□ -0.6
PHGDH-205ENST00000482968 RIPPLY3P57055 190 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 ADIRFQ15847 76 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 VWFP04275 2813 aa11.3□□□□□ -0.6
PHGDH-205ENST00000482968 M0R3E3 92 aa11.29□□□□□ -0.6
PHGDH-205ENST00000482968 PDZD11Q5EBL8 140 aa11.29□□□□□ -0.6
PHGDH-205ENST00000482968 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
PHGDH-205ENST00000482968 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
PHGDH-205ENST00000482968 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
PHGDH-205ENST00000482968 TRRAPQ9Y4A5 3859 aa11.29□□□□□ -0.6
PHGDH-205ENST00000482968 SOCS3O14543 225 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 IGLV1-51P01701 117 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
PHGDH-205ENST00000482968 GNG5P63218 68 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 IMMP2LQ96T52 175 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 ZNF705FA8MVS1 300 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-205ENST00000482968 K7EQG2 157 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 PHOX2AO14813 284 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 IQCJQ1A5X6 159 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 C9orf66Q5T8R8 295 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
PHGDH-205ENST00000482968 SORL1Q92673 2214 aa11.27□□□□□ -0.6
PHGDH-205ENST00000482968 TRAV25A0A0B4J276 109 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 ISLRO14498 428 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 PDE6DO43924 150 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 TYMSP04818 313 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 ID1P41134 155 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 LCN12Q6JVE5 192 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
PHGDH-205ENST00000482968 ZNF688P0C7X2 276 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 IGLL1P15814 213 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 CSN1S1P47710 185 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 PSG3Q16557 428 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 NDUFAF3Q9BU61 184 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
PHGDH-205ENST00000482968 F6UZH7 168 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 INSL3P51460 131 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 RPL23P62829 140 aaKnown RBP11.26□□□□□ -0.61
PHGDH-205ENST00000482968 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
PHGDH-205ENST00000482968 SPAG8Q99932 426 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-205ENST00000482968 NOTCH3Q9UM47 2321 aa11.25□□□□□ -0.61
PHGDH-205ENST00000482968 AMBPP02760 352 aa11.25□□□□□ -0.61
PHGDH-205ENST00000482968 SNRPD3P62318 126 aaKnown RBP11.25□□□□□ -0.61
PHGDH-205ENST00000482968 ZNF738Q8NE65 137 aa11.25□□□□□ -0.61
PHGDH-205ENST00000482968 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
PHGDH-205ENST00000482968 CLEC5AQ9NY25 188 aa11.25□□□□□ -0.61
PHGDH-205ENST00000482968 ZNF256Q9Y2P7 627 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-205ENST00000482968 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 DIRC3C9JPN6 131 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 PRAC2D3DTV9 90 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 PEX7O00628 323 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 TCRAP04437 139 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 GZMBP10144 247 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 DEFB1P60022 68 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 OR2K2Q8NGT1 345 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 RPUSD4Q96CM3 377 aaKnown RBP11.24□□□□□ -0.61
PHGDH-205ENST00000482968 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
PHGDH-205ENST00000482968 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
PHGDH-205ENST00000482968 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
PHGDH-205ENST00000482968 MRPL52Q86TS9 123 aaKnown RBP11.23□□□□□ -0.61
PHGDH-205ENST00000482968 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
PHGDH-205ENST00000482968 PARLQ9H300 379 aa11.23□□□□□ -0.61
PHGDH-205ENST00000482968 PRO1933Q9H354 126 aa11.23□□□□□ -0.61
PHGDH-205ENST00000482968 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-205ENST00000482968 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
PHGDH-205ENST00000482968 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-205ENST00000482968 RPL19P84098 196 aaKnown RBP11.23□□□□□ -0.61
PHGDH-205ENST00000482968 C11orf52Q96A22 123 aa11.23□□□□□ -0.61
PHGDH-205ENST00000482968 A0A1B0GV90 55 aa11.22□□□□□ -0.61
PHGDH-205ENST00000482968 ZNF705GA8MUZ8 300 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms