RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 LINC01587Q99440 93 aa11.75□□□□□ -0.53
CCDC78-212ENST00000482152 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
CCDC78-212ENST00000482152 CTXND1A0A1B0GTU2 59 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 LOC102723971A0A1B0GUV8 181 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 UMAD1C9J7I0 102 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 HMGB3O15347 200 aaKnown RBP11.74□□□□□ -0.53
CCDC78-212ENST00000482152 CRISP2P16562 243 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
CCDC78-212ENST00000482152 ERCC8Q13216 396 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 PMS2P11Q13670 270 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 ZNF493Q6ZR52 646 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 TMED6Q8WW62 240 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 ZNF492Q9P255 531 aa11.74□□□□□ -0.53
CCDC78-212ENST00000482152 SERTM2A0A1B0GWG4 89 aa11.73□□□□□ -0.53
CCDC78-212ENST00000482152 DIRC3C9JPN6 131 aa11.73□□□□□ -0.53
CCDC78-212ENST00000482152 PFDN1O60925 122 aa11.73□□□□□ -0.53
CCDC78-212ENST00000482152 ZNF138P52744 262 aa11.73□□□□□ -0.53
CCDC78-212ENST00000482152 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
CCDC78-212ENST00000482152 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
CCDC78-212ENST00000482152 NIPSNAP3BQ9BS92 247 aa11.73□□□□□ -0.53
CCDC78-212ENST00000482152 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
CCDC78-212ENST00000482152 KLLNB2CW77 178 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
CCDC78-212ENST00000482152 C1QBP02746 253 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 TCTAP57738 103 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 GFI1BQ5VTD9 330 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 CCDC28AQ8IWP9 274 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 VGLL1Q99990 258 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
CCDC78-212ENST00000482152 NKX6-2Q9C056 277 aaPredicted RBP11.72□□□□□ -0.53
CCDC78-212ENST00000482152 DKK2Q9UBU2 259 aa11.72□□□□□ -0.53
CCDC78-212ENST00000482152 C7orf71A4D174 169 aa11.71□□□□□ -0.53
CCDC78-212ENST00000482152 ZNF705GA8MUZ8 300 aaPredicted RBP11.71□□□□□ -0.53
CCDC78-212ENST00000482152 EIF3GO75821 320 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC78-212ENST00000482152 GPX1P07203 203 aa11.71□□□□□ -0.53
CCDC78-212ENST00000482152 PRB4P10163 310 aaPredicted RBP11.71□□□□□ -0.53
CCDC78-212ENST00000482152 TPT1P13693 172 aaKnown RBP11.71□□□□□ -0.53
CCDC78-212ENST00000482152 EIF5AL1Q6IS14 154 aaKnown RBP11.71□□□□□ -0.53
CCDC78-212ENST00000482152 DPPA3Q6W0C5 159 aa11.71□□□□□ -0.53
CCDC78-212ENST00000482152 AKAP14Q86UN6 197 aa11.71□□□□□ -0.53
CCDC78-212ENST00000482152 STOML3Q8TAV4 291 aa11.71□□□□□ -0.53
CCDC78-212ENST00000482152 C16orf74Q96GX8 76 aa11.71□□□□□ -0.53
CCDC78-212ENST00000482152 TRAV10A0A0B4J240 114 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 K7EQM0 130 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 EMP1P54849 157 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 ZNF726P1Q15940 193 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 C5orf17Q8NAS9 161 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 C2CD4CQ8TF44 421 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
CCDC78-212ENST00000482152 YTHDF2Q9Y5A9 579 aaKnown RBP11.7□□□□□ -0.54
CCDC78-212ENST00000482152 TRAV12-3A0A0B4J271 114 aa11.69□□□□□ -0.54
CCDC78-212ENST00000482152 FBLL1A6NHQ2 334 aaKnown RBP11.69□□□□□ -0.54
CCDC78-212ENST00000482152 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
CCDC78-212ENST00000482152 LGALSLQ3ZCW2 172 aaPredicted RBP11.69□□□□□ -0.54
CCDC78-212ENST00000482152 FAM222AQ5U5X8 452 aa11.69□□□□□ -0.54
CCDC78-212ENST00000482152 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
CCDC78-212ENST00000482152 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
CCDC78-212ENST00000482152 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
CCDC78-212ENST00000482152 SUMO1P63165 101 aaKnown RBP11.68□□□□□ -0.54
CCDC78-212ENST00000482152 KIR3DS1Q14943 382 aa11.68□□□□□ -0.54
CCDC78-212ENST00000482152 Q6ZTC4 211 aa11.68□□□□□ -0.54
CCDC78-212ENST00000482152 SSX7Q7RTT5 188 aa11.68□□□□□ -0.54
CCDC78-212ENST00000482152 IQCF2Q8IXL9 164 aa11.68□□□□□ -0.54
CCDC78-212ENST00000482152 ZFAND2AQ8N6M9 145 aa11.68□□□□□ -0.54
CCDC78-212ENST00000482152 TIMM8BQ9Y5J9 83 aaPredicted RBP11.68□□□□□ -0.54
CCDC78-212ENST00000482152 CSMD3Q7Z407 3707 aa11.68□□□□□ -0.54
CCDC78-212ENST00000482152 MAP1LC3B2A6NCE7 125 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 J3KRW8 73 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 HTN1P15515 57 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 AZU1P20160 251 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 RAB5CP51148 216 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
CCDC78-212ENST00000482152 MAP1LC3BQ9GZQ8 125 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 EPDR1Q9UM22 224 aa11.67□□□□□ -0.54
CCDC78-212ENST00000482152 hCG_2014768A0A024R1R8 64 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 DEFB131BA0A096LNP1 70 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 LCE6AA0A183 80 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 TCRAP04437 139 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 CD300CQ08708 224 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 ANXA2RQ3ZCQ2 193 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 ZNF680Q8NEM1 530 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 MBD3L1Q8WWY6 194 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 ARL2-SNX15V9GYD0 113 aa11.66□□□□□ -0.54
CCDC78-212ENST00000482152 PLAC8L1A1L4L8 177 aa11.65□□□□□ -0.54
CCDC78-212ENST00000482152 DAD1P61803 113 aa11.65□□□□□ -0.54
CCDC78-212ENST00000482152 BTN1A1Q13410 526 aa11.65□□□□□ -0.54
CCDC78-212ENST00000482152 SLC51BQ86UW2 128 aa11.65□□□□□ -0.54
CCDC78-212ENST00000482152 EIF4E3Q8N5X7 224 aaKnown RBP11.65□□□□□ -0.54
CCDC78-212ENST00000482152 TCEAL7Q9BRU2 100 aa11.65□□□□□ -0.54
CCDC78-212ENST00000482152 NDFIP1Q9BT67 221 aa11.65□□□□□ -0.54
CCDC78-212ENST00000482152 RPH3ALQ9UNE2 315 aa11.65□□□□□ -0.54
CCDC78-212ENST00000482152 GGTLC3B5MD39 225 aa11.64□□□□□ -0.55
CCDC78-212ENST00000482152 PRM2P04554 102 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms