RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 ARHGAP32A7KAX9 2087 aa11.24□□□□□ -0.61
CCDC78-211ENST00000481804 MRPS12O15235 138 aaKnown RBP11.23□□□□□ -0.61
CCDC78-211ENST00000481804 C21orf62Q9NYP8 219 aa11.23□□□□□ -0.61
CCDC78-211ENST00000481804 SRSF8Q9BRL6 282 aaKnown RBP11.23□□□□□ -0.61
CCDC78-211ENST00000481804 NHP2Q9NX24 153 aaKnown RBP11.23□□□□□ -0.61
CCDC78-211ENST00000481804 WI2-2373I1.2A0A1W2PRP0 233 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 K7ERJ3 54 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 ZNF80P51504 273 aaPredicted RBP11.22□□□□□ -0.61
CCDC78-211ENST00000481804 GTSCR1Q86UQ5 136 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 RNF5Q99942 180 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 TACC2O95359 2948 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 FXYD2P54710 66 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 PIP4P1Q86T03 277 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 ABHD17AQ96GS6 310 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 SPTBN1Q01082 2364 aaKnown RBP11.22□□□□□ -0.61
CCDC78-211ENST00000481804 FCER1GP30273 86 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 TMEM160Q9NX00 188 aa11.22□□□□□ -0.61
CCDC78-211ENST00000481804 IGKV2D-26A0A0A0MRZ7 120 aa11.21□□□□□ -0.61
CCDC78-211ENST00000481804 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
CCDC78-211ENST00000481804 SCGB2A1O75556 95 aa11.21□□□□□ -0.61
CCDC78-211ENST00000481804 DPM3Q9P2X0 92 aa11.21□□□□□ -0.61
CCDC78-211ENST00000481804 TNFRSF6BO95407 300 aa11.21□□□□□ -0.62
CCDC78-211ENST00000481804 IGKCP01834 107 aa11.21□□□□□ -0.62
CCDC78-211ENST00000481804 ZC2HC1BQ5TFG8 222 aa11.21□□□□□ -0.62
CCDC78-211ENST00000481804 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 NXT2Q9NPJ8 142 aaKnown RBP11.2□□□□□ -0.62
CCDC78-211ENST00000481804 ANKHD1Q8IWZ3 2542 aaKnown RBP11.2□□□□□ -0.62
CCDC78-211ENST00000481804 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 SHISA9B4DS77 424 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 CD3EP07766 207 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 GATA1P15976 413 aaPredicted RBP11.2□□□□□ -0.62
CCDC78-211ENST00000481804 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 COL12A1Q99715 3063 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 ATRXP46100 2492 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 K7EMI3 77 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 CEACAM3P40198 252 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 ARPC1AQ92747 370 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
CCDC78-211ENST00000481804 IGF2RP11717 2491 aa11.19□□□□□ -0.62
CCDC78-211ENST00000481804 ERCC8Q13216 396 aa11.19□□□□□ -0.62
CCDC78-211ENST00000481804 KLRD1Q13241 179 aa11.19□□□□□ -0.62
CCDC78-211ENST00000481804 ODF1Q14990 250 aa11.19□□□□□ -0.62
CCDC78-211ENST00000481804 NEGR1Q7Z3B1 354 aa11.19□□□□□ -0.62
CCDC78-211ENST00000481804 B9A039 149 aa11.19□□□□□ -0.62
CCDC78-211ENST00000481804 DPM2O94777 84 aa11.19□□□□□ -0.62
CCDC78-211ENST00000481804 TMEM11P17152 192 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 ZZEF1O43149 2961 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 TEX48A0A1B0GUV7 120 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 FANCD2OSQ96PS1 177 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 TMEM8BA6NDV4 472 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 IGLC6P0CF74 106 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 PAX8Q06710 450 aa11.18□□□□□ -0.62
CCDC78-211ENST00000481804 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.17□□□□□ -0.62
CCDC78-211ENST00000481804 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 AKAP6Q13023 2319 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 LRBAP50851 2863 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 IGLV11-55A0A075B6I3 123 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 IGHV3OR16-13A0A075B7E8 117 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 IGHV3-74A0A0B4J1X5 117 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 IGHV3-66A0A0C4DH42 116 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 RNF185Q96GF1 192 aa11.17□□□□□ -0.62
CCDC78-211ENST00000481804 LY6HO94772 140 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 PSMG4Q5JS54 123 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 SAMD13Q5VXD3 122 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 ATP5LO75964 103 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 SMIM17P0DL12 118 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 RNF182Q8N6D2 247 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 SVIPQ8NHG7 77 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 LY6LH3BQJ8 138 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 DTX2Q86UW9 622 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 DYNAPQ8N1N2 210 aa11.16□□□□□ -0.62
CCDC78-211ENST00000481804 GTSF1LQ9H1H1 148 aa11.15□□□□□ -0.62
CCDC78-211ENST00000481804 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.62
CCDC78-211ENST00000481804 IL17RELQ6ZVW7 336 aa11.15□□□□□ -0.62
CCDC78-211ENST00000481804 LINC01560Q8TB33 94 aa11.15□□□□□ -0.62
CCDC78-211ENST00000481804 HIST1H4GQ99525 98 aa11.15□□□□□ -0.62
CCDC78-211ENST00000481804 MRPL35Q9NZE8 188 aaKnown RBP11.15□□□□□ -0.62
CCDC78-211ENST00000481804 HIGD1BQ9P298 99 aa11.15□□□□□ -0.62
CCDC78-211ENST00000481804 NDPQ00604 133 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 CSMD1Q96PZ7 3565 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 PRAC2D3DTV9 90 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 J3QR89 54 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 NDUFA3O95167 84 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
CCDC78-211ENST00000481804 CEND1Q8N111 149 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 SMPXQ9UHP9 88 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 COL6A6A6NMZ7 2263 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 GOSR1O95249 250 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 ZNF479Q96JC4 524 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 SMAD5-AS1Q9Y6J3 95 aa11.14□□□□□ -0.63
CCDC78-211ENST00000481804 IGHV3-49A0A0A0MS15 119 aa11.13□□□□□ -0.63
CCDC78-211ENST00000481804 SMAGPQ0VAQ4 97 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms