RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 C7orf71A4D174 169 aa12.43□□□□□ -0.42
COL9A3-212ENST00000481800 M0R2N4 97 aa12.43□□□□□ -0.42
COL9A3-212ENST00000481800 PTTG1O95997 202 aa12.43□□□□□ -0.42
COL9A3-212ENST00000481800 TAS2R45P59539 299 aa12.43□□□□□ -0.42
COL9A3-212ENST00000481800 FXYD5Q96DB9 178 aa12.43□□□□□ -0.42
COL9A3-212ENST00000481800 IGKV2-40A0A087WW87 121 aaPredicted RBP12.42□□□□□ -0.42
COL9A3-212ENST00000481800 IGKV2D-40P01614 121 aaPredicted RBP12.42□□□□□ -0.42
COL9A3-212ENST00000481800 GPX1P07203 203 aa12.42□□□□□ -0.42
COL9A3-212ENST00000481800 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
COL9A3-212ENST00000481800 CSN1S1P47710 185 aa12.42□□□□□ -0.42
COL9A3-212ENST00000481800 UBE2L3P68036 154 aaKnown RBP12.42□□□□□ -0.42
COL9A3-212ENST00000481800 C9orf47Q6ZRZ4 202 aa12.42□□□□□ -0.42
COL9A3-212ENST00000481800 ATG101Q9BSB4 218 aa12.42□□□□□ -0.42
COL9A3-212ENST00000481800 IGLV2-18A0A075B6J9 118 aa12.41□□□□□ -0.42
COL9A3-212ENST00000481800 NUDT3O95989 172 aa12.41□□□□□ -0.42
COL9A3-212ENST00000481800 RANP62826 216 aaKnown RBP12.41□□□□□ -0.42
COL9A3-212ENST00000481800 KHDC3LQ587J8 217 aa12.41□□□□□ -0.42
COL9A3-212ENST00000481800 LINC00336Q6ZUF6 198 aa12.41□□□□□ -0.42
COL9A3-212ENST00000481800 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
COL9A3-212ENST00000481800 PHYHIPLQ96FC7 376 aa12.41□□□□□ -0.42
COL9A3-212ENST00000481800 MED28Q9H204 178 aa12.41□□□□□ -0.42
COL9A3-212ENST00000481800 GAGE12BA1L429 117 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 KLLNB2CW77 178 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 GAGE7O76087 117 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 NMBP08949 121 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 GAGE12FP0CL80 117 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 GAGE12GP0CL81 117 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 GAGE12IP0CL82 117 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 CRISP2P16562 243 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 CD300CQ08708 224 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 BTN1A1Q13410 526 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 ACOT6Q3I5F7 207 aaPredicted RBP12.4□□□□□ -0.42
COL9A3-212ENST00000481800 ZNF680Q8NEM1 530 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 FAM19A4Q96LR4 140 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 VGLL1Q99990 258 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 WFDC1Q9HC57 220 aa12.4□□□□□ -0.42
COL9A3-212ENST00000481800 A0A1W2PPV4 95 aa12.39□□□□□ -0.43
COL9A3-212ENST00000481800 ZNF324O75467 553 aaPredicted RBP12.39□□□□□ -0.43
COL9A3-212ENST00000481800 OR5I1Q13606 314 aa12.39□□□□□ -0.43
COL9A3-212ENST00000481800 EIF4E3Q8N5X7 224 aaKnown RBP12.39□□□□□ -0.43
COL9A3-212ENST00000481800 ZNF503Q96F45 646 aa12.39□□□□□ -0.43
COL9A3-212ENST00000481800 Q9H3A6 140 aa12.39□□□□□ -0.43
COL9A3-212ENST00000481800 ZNF492Q9P255 531 aa12.39□□□□□ -0.43
COL9A3-212ENST00000481800 M6PRP20645 277 aa12.38□□□□□ -0.43
COL9A3-212ENST00000481800 ZNF138P52744 262 aa12.38□□□□□ -0.43
COL9A3-212ENST00000481800 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
COL9A3-212ENST00000481800 DAZ2Q13117 558 aaKnown RBP12.38□□□□□ -0.43
COL9A3-212ENST00000481800 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
COL9A3-212ENST00000481800 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
COL9A3-212ENST00000481800 GSN-AS1Q9NRJ2 163 aa12.38□□□□□ -0.43
COL9A3-212ENST00000481800 RGS13O14921 159 aa12.37□□□□□ -0.43
COL9A3-212ENST00000481800 ANXA2RQ3ZCQ2 193 aa12.37□□□□□ -0.43
COL9A3-212ENST00000481800 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
COL9A3-212ENST00000481800 RXFP4Q8TDU9 374 aa12.37□□□□□ -0.43
COL9A3-212ENST00000481800 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
COL9A3-212ENST00000481800 RBAKDNA6NC62 111 aa12.36□□□□□ -0.43
COL9A3-212ENST00000481800 CCL18P55774 89 aa12.36□□□□□ -0.43
COL9A3-212ENST00000481800 ZNF266Q14584 549 aa12.36□□□□□ -0.43
COL9A3-212ENST00000481800 Q8TAT8 98 aa12.36□□□□□ -0.43
COL9A3-212ENST00000481800 CMTM2Q8TAZ6 248 aa12.36□□□□□ -0.43
COL9A3-212ENST00000481800 GNPNAT1Q96EK6 184 aaPredicted RBP12.36□□□□□ -0.43
COL9A3-212ENST00000481800 HYLS1Q96M11 299 aa12.36□□□□□ -0.43
COL9A3-212ENST00000481800 DNAH10Q8IVF4 4471 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 TRBV7-9A0A0J9YWB2 115 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 EIF3GO75821 320 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL9A3-212ENST00000481800 SOHLH1Q5JUK2 328 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 FAM74A1Q5RGS3 127 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 PQLC2Q6ZP29 291 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 Q6ZTI0 123 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 ARPC5LQ9BPX5 153 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
COL9A3-212ENST00000481800 IGHV1OR15-1A0A075B7D0 117 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 TRGV1A0A0A0MS02 117 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 PGPA6NDG6 321 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 DIRC3C9JPN6 131 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 RAB2AP61019 212 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 PRR9Q5T870 116 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 HSD17B11Q8NBQ5 300 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 C11orf72Q8NBR9 251 aa12.34□□□□□ -0.43
COL9A3-212ENST00000481800 A0A0J9YY99 117 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 PRSS29PA6NIE9 313 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 IBA57Q5T440 356 aaKnown RBP12.33□□□□□ -0.44
COL9A3-212ENST00000481800 Q6ZR54 194 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 AQP10Q96PS8 301 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 TMPRSS5Q9H3S3 457 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 RPH3ALQ9UNE2 315 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
COL9A3-212ENST00000481800 RTL8CO15255 209 aa12.32□□□□□ -0.44
COL9A3-212ENST00000481800 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
COL9A3-212ENST00000481800 GIPP09681 153 aaPredicted RBP12.32□□□□□ -0.44
COL9A3-212ENST00000481800 HOXA5P20719 270 aa12.32□□□□□ -0.44
COL9A3-212ENST00000481800 TCL1AP56279 114 aa12.32□□□□□ -0.44
COL9A3-212ENST00000481800 INO80EQ8NBZ0 244 aaPredicted RBP12.32□□□□□ -0.44
COL9A3-212ENST00000481800 LENEPQ9Y5L5 61 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms