RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 DIRAS3O95661 229 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 TMEM50AO95807 157 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 TSPAN13O95857 204 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 IGKV1-17P01599 117 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 OR5AC1P0C628 307 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 NUP62P37198 522 aaPredicted RBP1.09□□□□□ -2.23
USH2A-204ENST00000481786 PPP3R1P63098 170 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 FGL1Q08830 312 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 IFFO1Q0D2I5 559 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 OR2F1Q13607 317 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 GINS1Q14691 196 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 PSG3Q16557 428 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 C5orf47Q569G3 176 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 OR2G6Q5TZ20 316 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 ARPINQ7Z6K5 226 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 CAMK2N1Q7Z7J9 78 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 IQCF2Q8IXL9 164 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 SYS1Q8N2H4 156 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 LINC00337Q8N6G1 96 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 CYB561D1Q8N8Q1 229 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 TMEM75Q8N9X5 138 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 ZNF680Q8NEM1 530 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 OR1L8Q8NGR8 309 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 OR10J5Q8NHC4 309 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 Q8WTZ3 238 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 DIRC1Q969H9 104 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 TMEM230Q96A57 120 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 MCUR1Q96AQ8 359 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 GPR146Q96CH1 333 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 CMTM5Q96DZ9 223 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 TMEM56Q96MV1 263 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 HSD17B10Q99714 261 aaKnown RBP1.09□□□□□ -2.23
USH2A-204ENST00000481786 FAAP24Q9BTP7 215 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 DCSTAMPQ9H295 470 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 C12orf4Q9NQ89 552 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 CCL28Q9NRJ3 127 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 NDUFA4L2Q9NRX3 87 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 NUDT15Q9NV35 164 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 LGALS13Q9UHV8 139 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 GNG8Q9UK08 70 aa1.09□□□□□ -2.23
USH2A-204ENST00000481786 A0A075B6Q4 140 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TRBV6-7A0A0A0MS04 114 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.08□□□□□ -2.24
USH2A-204ENST00000481786 TRGV4A0A0C4DH28 118 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TEX50A0A1B0GTY4 177 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 FABP12A6NFH5 140 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TMEM212A6NML5 194 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 OR4C45A6NMZ5 311 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 BBIP1A8MTZ0 92 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TRDCB7Z8K6 153 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TNFRSF11BO00300 401 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 NDUFAB1O14561 156 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 MRASO14807 208 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 AGPAT2O15120 278 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 SPINK4O60575 86 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 CRTAPO75718 401 aaPredicted RBP1.08□□□□□ -2.24
USH2A-204ENST00000481786 SLC22A5O76082 557 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 IFNA7P01567 189 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 IGHV3-53P01767 116 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 FABP3P05413 133 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 CD2P06729 351 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 PFN1P07737 140 aaKnown RBP1.08□□□□□ -2.24
USH2A-204ENST00000481786 HTR1AP08908 422 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 DCKP27707 260 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TAS2R31P59538 309 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 VSNL1P62760 191 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 Q0VG73 95 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 ST3GAL4Q11206 333 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 ELOBQ15370 118 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 POU2AF1Q16633 256 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 GUK1Q16774 197 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TRIM16LQ309B1 348 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 C1orf194Q5T5A4 169 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 HES5Q5TA89 166 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 GLIPR1L1Q6UWM5 242 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 C6orf201Q7Z4U5 140 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 DAZ4Q86SG3 579 aaKnown RBP1.08□□□□□ -2.24
USH2A-204ENST00000481786 OR10G9Q8NGN4 311 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 OR4A4PQ8NGN8 299 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 OR4X1Q8NH49 305 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 LYPD6BQ8NI32 183 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 PYURFQ96I23 114 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 C16orf45Q96MC5 204 aaPredicted RBP1.08□□□□□ -2.24
USH2A-204ENST00000481786 BANF2Q9H503 90 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 GID8Q9NWU2 228 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 TAS2R4Q9NYW5 299 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 LINC00474Q9P2X8 69 aa1.08□□□□□ -2.24
USH2A-204ENST00000481786 CARHSP1Q9Y2V2 147 aaKnown RBP1.08□□□□□ -2.24
USH2A-204ENST00000481786 RBMX2Q9Y388 322 aaKnown RBP1.08□□□□□ -2.24
USH2A-204ENST00000481786 MUC21A0A0G2JKD1 596 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 A0A1B0GVG6 124 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 ERICH4A6NGS2 130 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 COLCA2A8K830 154 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 CORTO00230 105 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 BET1O15155 118 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 FABP7O15540 132 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 RBFOX2O43251 390 aaKnown RBP eCLIP1.07□□□□□ -2.24
USH2A-204ENST00000481786 ATG12O94817 140 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 HPRT1P00492 218 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms