RNA–Protein interactions for RNA: ENST00000481110.6

FGFR3-208, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-208ENST00000481110 PRB1P04280 392 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 CD7P09564 240 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 CGB3P0DN86 165 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 CGB7P0DN87 165 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
FGFR3-208ENST00000481110 FOXC2Q99958 501 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 PRSS22Q9GZN4 317 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 AMN1Q8IY45 258 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 LAMA1P25391 3075 aa13.13□□□□□ -0.31
FGFR3-208ENST00000481110 FLNBO75369 2602 aaKnown RBP13.12□□□□□ -0.31
FGFR3-208ENST00000481110 TRBV19A0A075B6N1 114 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 SPEGQ15772 3267 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 PSMG4Q5JS54 123 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 SAMD13Q5VXD3 122 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 GTSF1LQ9H1H1 148 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
FGFR3-208ENST00000481110 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 MSMBP08118 114 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 NRGNQ92686 78 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 C8orf49Q96NF6 230 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 TP73-AS1Q9UF72 201 aa13.12□□□□□ -0.31
FGFR3-208ENST00000481110 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
FGFR3-208ENST00000481110 P0C879 139 aa13.11□□□□□ -0.31
FGFR3-208ENST00000481110 MRPL52Q86TS9 123 aaKnown RBP13.11□□□□□ -0.31
FGFR3-208ENST00000481110 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
FGFR3-208ENST00000481110 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
FGFR3-208ENST00000481110 SYT8Q8NBV8 401 aa13.11□□□□□ -0.31
FGFR3-208ENST00000481110 YAE1D1Q9NRH1 226 aa13.11□□□□□ -0.31
FGFR3-208ENST00000481110 HLA-DMBP28068 263 aa13.11□□□□□ -0.31
FGFR3-208ENST00000481110 LEPP41159 167 aa13.11□□□□□ -0.31
FGFR3-208ENST00000481110 ZNF491Q8N8L2 437 aa13.11□□□□□ -0.31
FGFR3-208ENST00000481110 MGAQ8IWI9 3026 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 TMEM213A2RRL7 107 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 C11orf52Q96A22 123 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 DSCAML1Q8TD84 2053 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 IGHV1-69DA0A0B4J2H0 117 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 FCN3O75636 299 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 IGHV1-69P01742 117 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 CR1LQ2VPA4 569 aa13.1□□□□□ -0.31
FGFR3-208ENST00000481110 HERVK_113P61574 105 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 SP5Q6BEB4 398 aaPredicted RBP13.09□□□□□ -0.31
FGFR3-208ENST00000481110 MTURNQ8N3F0 131 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
FGFR3-208ENST00000481110 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 KIR2DL4Q99706 377 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 RHPN1-AS1Q9BWJ2 59 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 A0A1B0GW15 77 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 FAM231BA6NCW3 169 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 IGLV1-47P01700 117 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 LINC00173Q6ZV60 143 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 THAP8Q8NA92 274 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 RAX2Q96IS3 184 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
FGFR3-208ENST00000481110 SPOCK3Q9BQ16 436 aa13.09□□□□□ -0.31
FGFR3-208ENST00000481110 SRSF8Q9BRL6 282 aaKnown RBP13.09□□□□□ -0.31
FGFR3-208ENST00000481110 PRSS57Q6UWY2 283 aa13.08□□□□□ -0.32
FGFR3-208ENST00000481110 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
FGFR3-208ENST00000481110 TRBV7-1A0A0A6YYK4 115 aa13.08□□□□□ -0.32
FGFR3-208ENST00000481110 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
FGFR3-208ENST00000481110 EMP1P54849 157 aa13.08□□□□□ -0.32
FGFR3-208ENST00000481110 IFI27L1Q96BM0 104 aa13.08□□□□□ -0.32
FGFR3-208ENST00000481110 IGHV4-61A0A0C4DH41 118 aa13.07□□□□□ -0.32
FGFR3-208ENST00000481110 ZFP36P26651 326 aaKnown RBP13.07□□□□□ -0.32
FGFR3-208ENST00000481110 KIR3DS1Q14943 382 aa13.07□□□□□ -0.32
FGFR3-208ENST00000481110 TMEM75Q8N9X5 138 aa13.07□□□□□ -0.32
FGFR3-208ENST00000481110 FAM110DQ8TAY7 271 aaPredicted RBP13.07□□□□□ -0.32
FGFR3-208ENST00000481110 NDUFA3O95167 84 aa13.07□□□□□ -0.32
FGFR3-208ENST00000481110 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
FGFR3-208ENST00000481110 SCGB3A1Q96QR1 104 aa13.07□□□□□ -0.32
FGFR3-208ENST00000481110 Q8N7P7 452 aa13.06□□□□□ -0.32
FGFR3-208ENST00000481110 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
FGFR3-208ENST00000481110 PSMB11A5LHX3 300 aa13.06□□□□□ -0.32
FGFR3-208ENST00000481110 APOMO95445 188 aa13.06□□□□□ -0.32
FGFR3-208ENST00000481110 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
FGFR3-208ENST00000481110 DUX3Q96PT4 197 aa13.06□□□□□ -0.32
FGFR3-208ENST00000481110 IGHV1-24A0A0C4DH33 117 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 K7EIM0 57 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 HBDP02042 147 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 SEC11AP67812 179 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 IGLV2-23P01705 113 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 SYNJ2BPP57105 145 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 GTSCR1Q86UQ5 136 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 BCL6BQ8N143 479 aaPredicted RBP13.05□□□□□ -0.32
FGFR3-208ENST00000481110 TRAV12-3A0A0B4J271 114 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 PRSS2P07478 247 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 HOXB4P17483 251 aaPredicted RBP13.05□□□□□ -0.32
FGFR3-208ENST00000481110 TMEM249Q2WGJ8 235 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 TMEM170BQ5T4T1 132 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 TTC9CQ8N5M4 171 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 C8orf31Q8N9H6 132 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 OR11H12B2RN74 326 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 OR11H1Q8NG94 326 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 OR11H2Q8NH07 326 aa13.05□□□□□ -0.32
FGFR3-208ENST00000481110 VGLL1Q99990 258 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms