RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ODF3Q96PU9 254 aa10.63□□□□□ -0.71
LIMS3-203ENST00000480744 RYR1P21817 5038 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 M0R3E3 92 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 HOXA5P20719 270 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 ERCC8Q13216 396 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 OR5C1Q8NGR4 320 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 BLNKQ8WV28 456 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 TIMM9Q9Y5J7 89 aa10.62□□□□□ -0.71
LIMS3-203ENST00000480744 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 C16orf90A8MZG2 172 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 ZNF253O75346 499 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 PET100P0DJ07 73 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 PYYP10082 97 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 ATP6V1FQ16864 119 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 THAP6Q8TBB0 222 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 RXFP4Q8TDU9 374 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 PYGO2Q9BRQ0 406 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 SLC25A31Q9H0C2 315 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 TMPRSS5Q9H3S3 457 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
LIMS3-203ENST00000480744 C7orf71A4D174 169 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 G3V3Q6 166 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
LIMS3-203ENST00000480744 GIPP09681 153 aaPredicted RBP10.6□□□□□ -0.71
LIMS3-203ENST00000480744 HIST1H1EP10412 219 aaKnown RBP10.6□□□□□ -0.71
LIMS3-203ENST00000480744 RPL12P30050 165 aaKnown RBP10.6□□□□□ -0.71
LIMS3-203ENST00000480744 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 Q6ZTI0 123 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 EXOC3-AS1Q8N2X6 119 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 CHAC2Q8WUX2 184 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
LIMS3-203ENST00000480744 Q9H8V8 135 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 TMEM14CQ9P0S9 112 aa10.6□□□□□ -0.71
LIMS3-203ENST00000480744 NDUFB4O95168 129 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 BTN1A1Q13410 526 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 ZNF503Q96F45 646 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 NPCDR1Q9BY65 106 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 WFDC1Q9HC57 220 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 GSN-AS1Q9NRJ2 163 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
LIMS3-203ENST00000480744 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 MPDU1O75352 247 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
LIMS3-203ENST00000480744 CD300CQ08708 224 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
LIMS3-203ENST00000480744 PDE6HQ13956 83 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 ZNF680Q8NEM1 530 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 LINC00477Q96M19 166 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 SLC25A2Q9BXI2 301 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 SMIM3Q9BZL3 60 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 AGPAT4-IT1Q9H0P7 198 aa10.58□□□□□ -0.72
LIMS3-203ENST00000480744 IGKV2-40A0A087WW87 121 aaPredicted RBP10.57□□□□□ -0.72
LIMS3-203ENST00000480744 TRGV1A0A0A0MS02 117 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 IGKV2D-40P01614 121 aaPredicted RBP10.57□□□□□ -0.72
LIMS3-203ENST00000480744 GPX1P07203 203 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 ICAM4Q14773 271 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 ESRGQ1W209 222 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 TTC32Q5I0X7 151 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 FAM122CQ6P4D5 195 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 EIF4E3Q8N5X7 224 aaKnown RBP10.57□□□□□ -0.72
LIMS3-203ENST00000480744 ATP5SQ99766 215 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 WDR61Q9GZS3 305 aaKnown RBP10.57□□□□□ -0.72
LIMS3-203ENST00000480744 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
LIMS3-203ENST00000480744 KLLNB2CW77 178 aa10.56□□□□□ -0.72
LIMS3-203ENST00000480744 TMEM78Q5T7P6 136 aa10.56□□□□□ -0.72
LIMS3-203ENST00000480744 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
LIMS3-203ENST00000480744 C11orf72Q8NBR9 251 aa10.56□□□□□ -0.72
LIMS3-203ENST00000480744 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
LIMS3-203ENST00000480744 RNF222A6NCQ9 220 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 H3BNG1 76 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 RGS13O14921 159 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 ZNF324O75467 553 aaPredicted RBP10.55□□□□□ -0.72
LIMS3-203ENST00000480744 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 AQP10Q96PS8 301 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 VGLL1Q99990 258 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 FUT9Q9Y231 359 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 MRPS16Q9Y3D3 137 aaKnown RBP10.55□□□□□ -0.72
LIMS3-203ENST00000480744 KLF12Q9Y4X4 402 aa10.55□□□□□ -0.72
LIMS3-203ENST00000480744 SMLR1H3BR10 107 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 OR10J4P0C629 311 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 NBEAP1P0C6P0 100 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 ANXA2RQ3ZCQ2 193 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 PRR9Q5T870 116 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 C9orf47Q6ZRZ4 202 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 VSIG2Q96IQ7 327 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 LINC00467Q9BRT7 94 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 UPK3BQ9BT76 320 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 OR51M1Q9H341 326 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 Q9H3A6 140 aa10.54□□□□□ -0.72
LIMS3-203ENST00000480744 FXYD6-FXYD2A0A087WZ82 144 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 A0A096LPF7 62 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 CRISP2P16562 243 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 TCL1AP56279 114 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 ARPC5LQ9BPX5 153 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms