RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 LINC01545Q5VT33 79 aa7.76□□□□□ -1.17
VEGFA-212ENST00000480614 IGKV1-12A0A0C4DH73 117 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 IGKV1D-12P01611 117 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 PMVKQ15126 192 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 NEUROG3Q9Y4Z2 214 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 TRAV8-3A0A0A6YYJ7 113 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 IGKV1-5P01602 117 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 PRB3Q04118 309 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 PAQR4Q8N4S7 273 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 TMEM105Q8N8V8 129 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 Q8TAT8 98 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 LYNX1G3V0Z9 82 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 LYNX1P0DP58 116 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 MBD3L4A6NDZ8 208 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 MBD3L3A6NE82 208 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 MBD3L5A6NJ08 208 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 RNASE2P10153 161 aaKnown RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 GATA4P43694 442 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 MBD3L2Q8NHZ7 208 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 PINLYPA6NC86 204 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 MDS2Q8NDY4 140 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 OR11H6Q8NGC7 330 aa7.75□□□□□ -1.17
VEGFA-212ENST00000480614 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
VEGFA-212ENST00000480614 ADAMTSL5Q6ZMM2 481 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 ZCCHC24Q8N2G6 241 aaKnown RBP7.74□□□□□ -1.17
VEGFA-212ENST00000480614 RPP25LQ8N5L8 163 aaKnown RBP7.74□□□□□ -1.17
VEGFA-212ENST00000480614 A0A087WWL8 130 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 A0A0G2JNJ9 132 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 hDV102S1A0JD36 115 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 CXCL1P09341 107 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 FAM110DQ8TAY7 271 aaPredicted RBP7.74□□□□□ -1.17
VEGFA-212ENST00000480614 Q9UFV3 132 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 PRSS46E5RG02 174 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 CFPP27918 469 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 GTSF1LQ9H1H1 148 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 C15orf62A8K5M9 175 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 TMEM14BQ9NUH8 114 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 J3QLI3 93 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 PSPNO60542 156 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 SLAQ13239 276 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 STPG4Q8N801 248 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 DEFB130BP0DP73 79 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 DEFB130AP0DP74 79 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 KLRD1Q13241 179 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 IGKV1-27A0A075B6S5 117 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 LHFPL4Q7Z7J7 247 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 MSRB2Q9Y3D2 182 aa7.74□□□□□ -1.17
VEGFA-212ENST00000480614 C10orf55Q5SWW7 151 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 Q8TCH9 128 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 UBE2E1P51965 193 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 HGFACQ04756 655 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 Q0VG73 95 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 H3BQ85 93 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 CD177Q8N6Q3 437 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 C9JAW5 83 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 LINC01619G3V211 115 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 MSMBP08118 114 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 LY6DQ14210 128 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 GFI1Q99684 422 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 IGHG3P01860 377 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 C11orf44Q8N8P7 122 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 SAA4P35542 130 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 C10orf91Q5T1B1 145 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 SPXQ9BT56 116 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 IGHG4P01861 327 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 NDPQ00604 133 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 VSIRQ9H7M9 311 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 NDUFA4O00483 81 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 AMN1Q8IY45 258 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 Q8N8P6 123 aa7.73□□□□□ -1.17
VEGFA-212ENST00000480614 CD59P13987 128 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 ZNF664Q8N3J9 261 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 VWCEQ96DN2 955 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 FXYD7P58549 80 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 UBE2E2Q96LR5 201 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 DMRTC2Q8IXT2 367 aaPredicted RBP7.72□□□□□ -1.17
VEGFA-212ENST00000480614 PNRC2Q9NPJ4 139 aaKnown RBP7.72□□□□□ -1.17
VEGFA-212ENST00000480614 IGHV3-53P01767 116 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 F8W1H4 67 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 TMEM258P61165 79 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 C9orf153Q5TBE3 101 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 ZNF625Q96I27 306 aaPredicted RBP7.72□□□□□ -1.17
VEGFA-212ENST00000480614 NTF4P34130 210 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 WFDC12Q8WWY7 111 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 CEP295Q9C0D2 2601 aa7.72□□□□□ -1.17
VEGFA-212ENST00000480614 A0A1W2PPI3 338 aa7.71□□□□□ -1.17
VEGFA-212ENST00000480614 HERVK_113P63121 156 aa7.71□□□□□ -1.17
VEGFA-212ENST00000480614 CITED1Q99966 193 aa7.71□□□□□ -1.17
VEGFA-212ENST00000480614 LINC00527Q9UJ94 153 aa7.71□□□□□ -1.17
VEGFA-212ENST00000480614 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.17
VEGFA-212ENST00000480614 IGHV1OR15-1A0A075B7D0 117 aa7.71□□□□□ -1.17
VEGFA-212ENST00000480614 C3orf79P0CE67 100 aa7.71□□□□□ -1.17
VEGFA-212ENST00000480614 C22orf46C9J442 243 aa7.71□□□□□ -1.18
VEGFA-212ENST00000480614 EGR2P11161 476 aaPredicted RBP7.71□□□□□ -1.18
VEGFA-212ENST00000480614 CDKN1BP46527 198 aa7.71□□□□□ -1.18
VEGFA-212ENST00000480614 GAS1P54826 345 aa7.71□□□□□ -1.18
VEGFA-212ENST00000480614 IGHV1-24A0A0C4DH33 117 aa7.71□□□□□ -1.18
VEGFA-212ENST00000480614 TRAV3A0A0B4J244 114 aa7.71□□□□□ -1.18
VEGFA-212ENST00000480614 K7EMI3 77 aa7.71□□□□□ -1.18
VEGFA-212ENST00000480614 SYNJ2BPP57105 145 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms