RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 TUBA4BQ9H853 241 aa3.25□□□□□ -1.89
UPF3A-205ENST00000479712 COMMD3Q9UBI1 195 aa3.25□□□□□ -1.89
UPF3A-205ENST00000479712 APLNQ9ULZ1 77 aa3.25□□□□□ -1.89
UPF3A-205ENST00000479712 ZNF257Q9Y2Q1 563 aa3.25□□□□□ -1.89
UPF3A-205ENST00000479712 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 GABARAPH6UMI1 98 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 GPR31O00270 319 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 OVOL1O14753 267 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 MED6O75586 246 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 DHFRP00374 187 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 TRGV3P03979 118 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 CD74P04233 296 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 HIST1H1BP16401 226 aaKnown RBP3.24□□□□□ -1.89
UPF3A-205ENST00000479712 GNRHRP30968 328 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 FUSP35637 526 aaKnown RBP eCLIP3.24□□□□□ -1.89
UPF3A-205ENST00000479712 RPL27AP46776 148 aaKnown RBP3.24□□□□□ -1.89
UPF3A-205ENST00000479712 TPPP2P59282 170 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 SLAQ13239 276 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 TNXAQ16473 311 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 LGALS9BQ3B8N2 356 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 ZNF818PQ6ZRF7 136 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 NTM-AS1Q6ZSK4 140 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 ZNF767PQ75MW2 155 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 LHFPL1Q86WI0 220 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 NECAP1Q8NC96 275 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 GRPEL2Q8TAA5 225 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 MITD1Q8WV92 249 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 DEDD2Q8WXF8 326 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 TSC22D3Q99576 134 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 ZNF2Q9BSG1 426 aaPredicted RBP3.24□□□□□ -1.89
UPF3A-205ENST00000479712 ZNF430Q9H8G1 570 aaPredicted RBP3.24□□□□□ -1.89
UPF3A-205ENST00000479712 SLC2A9Q9NRM0 540 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 TAS2R8Q9NYW2 309 aa3.24□□□□□ -1.89
UPF3A-205ENST00000479712 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 FAM25AB3EWG3 89 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 FAM25CB3EWG5 89 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 FAM25GB3EWG6 89 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 BOLA2-SMG1P6H3BVE0 249 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 UPK2O00526 184 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 CYB5BO43169 146 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 GSTZ1O43708 216 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 HPGDSO60760 199 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 PGLYRP1O75594 196 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 ATG12O94817 140 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 YIF1AO95070 293 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 PTHLHP12272 177 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 HLA-GP17693 338 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 PSMB6P28072 239 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 NUP62P37198 522 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 TSPAN5P62079 268 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 RPL23P62829 140 aaKnown RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 SURF2Q15527 256 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 RNASE10Q5GAN6 216 aaKnown RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 C1orf134Q5TEV5 83 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 AADACL3Q5VUY0 350 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 Q6ZVH6 145 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 TMEM229BQ8NBD8 167 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 OR5T1Q8NG75 326 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 OR2K2Q8NGT1 345 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 DYNC2LI1Q8TCX1 351 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 SMIM4Q8WVI0 70 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 DGCR14Q96DF8 476 aaKnown RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 PHB2Q99623 299 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 DCUN1D5Q9BTE7 237 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 FAM103A1Q9BTL3 118 aaKnown RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 NXF2Q9GZY0 626 aaKnown RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 FXYD6Q9H0Q3 95 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 FKBP11Q9NYL4 201 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 RSL24D1Q9UHA3 163 aaKnown RBP3.23□□□□□ -1.89
UPF3A-205ENST00000479712 PRNDQ9UKY0 176 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 TNXBP22105 4242 aa3.23□□□□□ -1.89
UPF3A-205ENST00000479712 PIGBOS1A0A0B4J2F0 54 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 TMEM223A0PJW6 202 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 MEIS3P1A6NDR6 274 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 IGLL5B9A064 214 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 LGALS9O00182 355 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 IGLV1-51P01701 117 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 PMP2P02689 132 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 HLA-DMAP28067 261 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 FXYD4P59646 89 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 OR2B8PP59922 312 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 RHOGP84095 191 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 ATP5G2Q06055 141 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 SPCS2Q15005 226 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 IDO2Q6ZQW0 420 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 LYG2Q86SG7 212 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 SNX29P2Q8IUI4 249 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 CLVS1Q8IUQ0 354 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-205ENST00000479712 UBAC2Q8NBM4 344 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 OR1L8Q8NGR8 309 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 OR51H1Q8NH63 302 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 TERB2Q8NHR7 220 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 ZFAND1Q8TCF1 268 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 BAALCQ8WXS3 180 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 OR4C12Q96R67 309 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 COMMD5Q9GZQ3 224 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 MIXL1Q9H2W2 232 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 WFDC1Q9HC57 220 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 ZNF355PQ9NSJ1 428 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 COA4Q9NYJ1 87 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms