RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.06	□□□□□ -0.32
RFK-204	ENST00000479197	ARL6IP6	Q8N6S5	226 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	VGLL1	Q99990	258 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	RPH3AL	Q9UNE2	315 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	GOLT1B	Q9Y3E0	138 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197		X6R8D5	127 aa		13.06	□□□□□ -0.32
RFK-204	ENST00000479197	GGTLC3	B5MD39	225 aa		13.05	□□□□□ -0.32
RFK-204	ENST00000479197	SLC25A5	P05141	298 aa	Known RBP	13.05	□□□□□ -0.32
RFK-204	ENST00000479197	H2AFB1	P0C5Y9	115 aa		13.05	□□□□□ -0.32
RFK-204	ENST00000479197	LEP	P41159	167 aa		13.05	□□□□□ -0.32
RFK-204	ENST00000479197	C5orf17	Q8NAS9	161 aa		13.05	□□□□□ -0.32
RFK-204	ENST00000479197	BOLA1	Q9Y3E2	137 aa		13.05	□□□□□ -0.32
RFK-204	ENST00000479197	IGHV3OR16-12	A0A075B7B8	117 aa		13.04	□□□□□ -0.32
RFK-204	ENST00000479197	UBE2G2	P60604	165 aa		13.04	□□□□□ -0.32
RFK-204	ENST00000479197	SUMO1	P63165	101 aa	Known RBP	13.04	□□□□□ -0.32
RFK-204	ENST00000479197	C1orf158	Q8N1D5	194 aa		13.04	□□□□□ -0.32
RFK-204	ENST00000479197	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.04	□□□□□ -0.32
RFK-204	ENST00000479197		A0A0J9YWU9	116 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197		A0A1B0GV50	99 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	MIF	P14174	115 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	GNG5	P63218	68 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	GOLT1A	Q6ZVE7	132 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	ZNF492	Q9P255	531 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	FAM74A7	A6NL05	159 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	ZNF138	P52744	262 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	KIR3DS1	Q14943	382 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197		Q8NAQ8	132 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	FAM19A4	Q96LR4	140 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	TMEM208	Q9BTX3	173 aa		13.03	□□□□□ -0.32
RFK-204	ENST00000479197	NKX6-2	Q9C056	277 aa	Predicted RBP	13.03	□□□□□ -0.32
RFK-204	ENST00000479197	DNAH7	Q8WXX0	4024 aa		13.02	□□□□□ -0.32
RFK-204	ENST00000479197	SERTM2	A0A1B0GWG4	89 aa		13.02	□□□□□ -0.33
RFK-204	ENST00000479197	TCRA	P04437	139 aa		13.02	□□□□□ -0.33
RFK-204	ENST00000479197	GFI1B	Q5VTD9	330 aa		13.02	□□□□□ -0.33
RFK-204	ENST00000479197		Q8TAT8	98 aa		13.02	□□□□□ -0.33
RFK-204	ENST00000479197	NEU1	Q99519	415 aa		13.02	□□□□□ -0.33
RFK-204	ENST00000479197	C11orf68	Q9H3H3	251 aa	Known RBP	13.02	□□□□□ -0.33
RFK-204	ENST00000479197	ARL2-SNX15	V9GYD0	113 aa		13.02	□□□□□ -0.33
RFK-204	ENST00000479197	IGHV4-28	A0A0C4DH34	117 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197	SMIM9	A6NGZ8	99 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197		J3KRW8	73 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197	RBMY1A1	P0DJD3	496 aa	Known RBP	13.01	□□□□□ -0.33
RFK-204	ENST00000479197	RBMY1C	P0DJD4	496 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197	CRISP2	P16562	243 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197	RBMY1F	Q15415	496 aa	Known RBP	13.01	□□□□□ -0.33
RFK-204	ENST00000479197	ALKAL2	Q6UX46	152 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197	TMEM256	Q8N2U0	113 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197	EPDR1	Q9UM22	224 aa		13.01	□□□□□ -0.33
RFK-204	ENST00000479197	TRAV1-1	A0A0B4J248	108 aa		13	□□□□□ -0.33
RFK-204	ENST00000479197	TRBV7-9	A0A0J9YWB2	115 aa		13	□□□□□ -0.33
RFK-204	ENST00000479197	KLLN	B2CW77	178 aa		13	□□□□□ -0.33
RFK-204	ENST00000479197	TEX46	H3BTG2	121 aa		13	□□□□□ -0.33
RFK-204	ENST00000479197	NMB	P08949	121 aa		13	□□□□□ -0.33
RFK-204	ENST00000479197	C20orf144	Q9BQM9	153 aa		13	□□□□□ -0.33
RFK-204	ENST00000479197	ATG101	Q9BSB4	218 aa		13	□□□□□ -0.33
RFK-204	ENST00000479197		K7EQM0	130 aa		12.99	□□□□□ -0.33
RFK-204	ENST00000479197	DEFB4A	O15263	64 aa		12.99	□□□□□ -0.33
RFK-204	ENST00000479197	IFNA7	P01567	189 aa		12.99	□□□□□ -0.33
RFK-204	ENST00000479197	HBE1	P02100	147 aa		12.99	□□□□□ -0.33
RFK-204	ENST00000479197	PPT1	P50897	306 aa		12.99	□□□□□ -0.33
RFK-204	ENST00000479197	LENEP	Q9Y5L5	61 aa		12.99	□□□□□ -0.33
RFK-204	ENST00000479197	TRAV8-1	A0A0A6YYK1	113 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	PAGE4	O60829	102 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	GPX1	P07203	203 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	CST9LP1	Q5W188	147 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	ZFAND2A	Q8N6M9	145 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	CYB561D1	Q8N8Q1	229 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	LINC01587	Q99440	93 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	TRAV12-3	A0A0B4J271	114 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	C7orf71	A4D174	169 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	BTN1A1	Q13410	526 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	RRN3P1	Q2M238	152 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	CCDC28A	Q8IWP9	274 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197	TCEAL7	Q9BRU2	100 aa		12.98	□□□□□ -0.33
RFK-204	ENST00000479197		H7BYZ3	331 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	PEX7	O00628	323 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	RNASE4	P34096	147 aa	Known RBP	12.97	□□□□□ -0.33
RFK-204	ENST00000479197	ATP5G3	P48201	142 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	CCL20	P78556	96 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	TMEM75	Q8N9X5	138 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	HIST1H2BA	Q96A08	127 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	SGK494	Q96LW2	274 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	NIPSNAP3B	Q9BS92	247 aa		12.97	□□□□□ -0.33
RFK-204	ENST00000479197	TAS2R60	P59551	318 aa		12.96	□□□□□ -0.33
RFK-204	ENST00000479197	PRR9	Q5T870	116 aa		12.96	□□□□□ -0.33
RFK-204	ENST00000479197	MANBAL	Q9NQG1	85 aa		12.96	□□□□□ -0.33
RFK-204	ENST00000479197	LOC102723971	A0A1B0GUV8	181 aa		12.95	□□□□□ -0.34
RFK-204	ENST00000479197	FBLL1	A6NHQ2	334 aa	Known RBP	12.95	□□□□□ -0.34
RFK-204	ENST00000479197	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.95	□□□□□ -0.34
RFK-204	ENST00000479197	IL17D	Q8TAD2	202 aa		12.95	□□□□□ -0.34
RFK-204	ENST00000479197	MUC7	Q8TAX7	377 aa		12.95	□□□□□ -0.34
RFK-204	ENST00000479197	GNG13	Q9P2W3	67 aa		12.95	□□□□□ -0.34
RFK-204	ENST00000479197	PSG8	Q9UQ74	426 aa		12.95	□□□□□ -0.34
RFK-204	ENST00000479197	TMEM189	A5PLL7	270 aa		12.94	□□□□□ -0.34
RFK-204	ENST00000479197		F6UZH7	168 aa		12.94	□□□□□ -0.34
RFK-204	ENST00000479197	ZNF324	O75467	553 aa	Predicted RBP	12.94	□□□□□ -0.34
RFK-204	ENST00000479197	IGLV2-11	P01706	119 aa		12.94	□□□□□ -0.34
RFK-204	ENST00000479197	PRM2	P04554	102 aa		12.94	□□□□□ -0.34
RFK-204	ENST00000479197	HTN1	P15515	57 aa		12.94	□□□□□ -0.34
RFK-204	ENST00000479197	FLI1	Q01543	452 aa	Predicted RBP	12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms