RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SMLR1H3BR10 107 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 CRISP2P16562 243 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 TAS2R60P59551 318 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 RANP62826 216 aaKnown RBP11.12□□□□□ -0.63
C9orf3-217ENST00000479161 EIF5AP63241 154 aaKnown RBP11.12□□□□□ -0.63
C9orf3-217ENST00000479161 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 TMED6Q8WW62 240 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
C9orf3-217ENST00000479161 KLLNB2CW77 178 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 H7BYZ3 331 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 CXorf1O96002 111 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 ARL14EPLP0DKL9 152 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 TCTAP57738 103 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 ZNF493Q6ZR52 646 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 BAP18Q8IXM2 172 aa11.11□□□□□ -0.63
C9orf3-217ENST00000479161 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-217ENST00000479161 KLK5Q9Y337 293 aaPredicted RBP11.11□□□□□ -0.63
C9orf3-217ENST00000479161 CTXND1A0A1B0GTU2 59 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 SERTM2A0A1B0GWG4 89 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 CXorf65A6NEN9 183 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 UMAD1C9J7I0 102 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 DEFB4AO15263 64 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 AKR1C8PQ5T2L2 129 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
C9orf3-217ENST00000479161 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 LOC102723971A0A1B0GUV8 181 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 KANTRA0A1W2PQU2 76 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 DIRC3C9JPN6 131 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 BCL2L11O43521 198 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 GCHFRP30047 84 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 LYSTQ99698 3801 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 LINC00467Q9BRT7 94 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 DKK2Q9UBU2 259 aa11.09□□□□□ -0.63
C9orf3-217ENST00000479161 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
C9orf3-217ENST00000479161 A0A1W2PRE2 83 aa11.08□□□□□ -0.64
C9orf3-217ENST00000479161 PGPA6NDG6 321 aa11.08□□□□□ -0.64
C9orf3-217ENST00000479161 ZNF138P52744 262 aa11.08□□□□□ -0.64
C9orf3-217ENST00000479161 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
C9orf3-217ENST00000479161 CMTM2Q8TAZ6 248 aa11.08□□□□□ -0.64
C9orf3-217ENST00000479161 LINC01587Q99440 93 aa11.08□□□□□ -0.64
C9orf3-217ENST00000479161 PYGO2Q9BRQ0 406 aa11.08□□□□□ -0.64
C9orf3-217ENST00000479161 NKX6-2Q9C056 277 aaPredicted RBP11.08□□□□□ -0.64
C9orf3-217ENST00000479161 FBLL1A6NHQ2 334 aaKnown RBP11.07□□□□□ -0.64
C9orf3-217ENST00000479161 LYRM9A8MSI8 78 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 ZNF324O75467 553 aaPredicted RBP11.07□□□□□ -0.64
C9orf3-217ENST00000479161 IFNA7P01567 189 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 ERCC8Q13216 396 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 ZNF726P1Q15940 193 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 C12orf74Q32Q52 190 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 DPPA3Q6W0C5 159 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 TMUB2Q71RG4 321 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 ZFAND2AQ8N6M9 145 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 STOML3Q8TAV4 291 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 TMEM263Q8WUH6 116 aaKnown RBP11.07□□□□□ -0.64
C9orf3-217ENST00000479161 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 VGLL1Q99990 258 aa11.07□□□□□ -0.64
C9orf3-217ENST00000479161 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-217ENST00000479161 TRAV10A0A0B4J240 114 aa11.06□□□□□ -0.64
C9orf3-217ENST00000479161 C7orf71A4D174 169 aa11.06□□□□□ -0.64
C9orf3-217ENST00000479161 LINC00862A6NCI5 91 aa11.06□□□□□ -0.64
C9orf3-217ENST00000479161 HMGB3O15347 200 aaKnown RBP11.06□□□□□ -0.64
C9orf3-217ENST00000479161 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-217ENST00000479161 PMS2P11Q13670 270 aa11.06□□□□□ -0.64
C9orf3-217ENST00000479161 C5orf17Q8NAS9 161 aa11.06□□□□□ -0.64
C9orf3-217ENST00000479161 RNASE8Q8TDE3 154 aaKnown RBP11.06□□□□□ -0.64
C9orf3-217ENST00000479161 NIPSNAP3BQ9BS92 247 aa11.06□□□□□ -0.64
C9orf3-217ENST00000479161 ZNF471Q9BX82 626 aaPredicted RBP11.06□□□□□ -0.64
C9orf3-217ENST00000479161 YTHDF2Q9Y5A9 579 aaKnown RBP11.06□□□□□ -0.64
C9orf3-217ENST00000479161 LCE6AA0A183 80 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 PLAC8L1A1L4L8 177 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 ZNF705GA8MUZ8 300 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-217ENST00000479161 GPX1P07203 203 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 TPT1P13693 172 aaKnown RBP11.05□□□□□ -0.64
C9orf3-217ENST00000479161 KIR3DS1Q14943 382 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 LGALSLQ3ZCW2 172 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-217ENST00000479161 TEX261Q6UWH6 196 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 FAM210BQ96KR6 192 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 SACSQ9NZJ4 4579 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 CELA1Q9UNI1 258 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 ARL2-SNX15V9GYD0 113 aa11.05□□□□□ -0.64
C9orf3-217ENST00000479161 EIF3GO75821 320 aaKnown RBP eCLIP11.04□□□□□ -0.64
C9orf3-217ENST00000479161 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 FAM222AQ5U5X8 452 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 EIF5AL1Q6IS14 154 aaKnown RBP11.04□□□□□ -0.64
C9orf3-217ENST00000479161 Q6ZTC4 211 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 SSX7Q7RTT5 188 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 ZNF680Q8NEM1 530 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 C2CD4CQ8TF44 421 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
C9orf3-217ENST00000479161 TRAV12-3A0A0B4J271 114 aa11.03□□□□□ -0.64
C9orf3-217ENST00000479161 K7EQM0 130 aa11.03□□□□□ -0.64
C9orf3-217ENST00000479161 AZU1P20160 251 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms