RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 C18orf15Q96N68 181 aa13.86□□□□□ -0.19
HPS4-211ENST00000479064 MARVELD1Q9BSK0 173 aa13.86□□□□□ -0.19
HPS4-211ENST00000479064 WDR61Q9GZS3 305 aaKnown RBP13.86□□□□□ -0.19
HPS4-211ENST00000479064 OR5AC2Q9NZP5 309 aa13.86□□□□□ -0.19
HPS4-211ENST00000479064 PKD1P98161 4303 aa13.85□□□□□ -0.19
HPS4-211ENST00000479064 NBDYA0A0U1RRE5 68 aa13.85□□□□□ -0.19
HPS4-211ENST00000479064 H0YIZ8 118 aa13.85□□□□□ -0.19
HPS4-211ENST00000479064 ANXA2RQ3ZCQ2 193 aa13.85□□□□□ -0.19
HPS4-211ENST00000479064 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
HPS4-211ENST00000479064 GNPNAT1Q96EK6 184 aaPredicted RBP13.85□□□□□ -0.19
HPS4-211ENST00000479064 AGPAT4-IT1Q9H0P7 198 aa13.85□□□□□ -0.19
HPS4-211ENST00000479064 KIAA1109Q2LD37 5005 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 C17orf112F2Z3M2 114 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 J3KRW8 73 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 ZNF324O75467 553 aaPredicted RBP13.84□□□□□ -0.19
HPS4-211ENST00000479064 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 PET100P0DJ07 73 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 IFITM3Q01628 133 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 CLINT1Q14677 625 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 LRRC37A5PQ49AS3 106 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 BLNKQ8WV28 456 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 OR51M1Q9H341 326 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 LINC00588Q9Y4M8 146 aa13.84□□□□□ -0.19
HPS4-211ENST00000479064 MUC4Q99102 2169 aa13.83□□□□□ -0.19
HPS4-211ENST00000479064 TRAV26-1A0A087WT03 109 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 GAGE12BA1L429 117 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 GAGE7O76087 117 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 GAGE12FP0CL80 117 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 GAGE12GP0CL81 117 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 GAGE12IP0CL82 117 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 ERCC8Q13216 396 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 OR5I1Q13606 314 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 ICAM4Q14773 271 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 TMEM78Q5T7P6 136 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 MIR17HGQ75NE6 70 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 EXOC3-AS1Q8N2X6 119 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 EIF4E3Q8N5X7 224 aaKnown RBP13.83□□□□□ -0.2
HPS4-211ENST00000479064 C11orf72Q8NBR9 251 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 PPP1R1CQ8WVI7 109 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 FUT9Q9Y231 359 aa13.83□□□□□ -0.2
HPS4-211ENST00000479064 H2BFSP57053 126 aa13.82□□□□□ -0.2
HPS4-211ENST00000479064 SSX7Q7RTT5 188 aa13.82□□□□□ -0.2
HPS4-211ENST00000479064 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
HPS4-211ENST00000479064 ATP5SQ99766 215 aa13.82□□□□□ -0.2
HPS4-211ENST00000479064 PAXXQ9BUH6 204 aa13.82□□□□□ -0.2
HPS4-211ENST00000479064 GPX1P07203 203 aa13.81□□□□□ -0.2
HPS4-211ENST00000479064 HOXA5P20719 270 aa13.81□□□□□ -0.2
HPS4-211ENST00000479064 DEFA1P59665 94 aa13.81□□□□□ -0.2
HPS4-211ENST00000479064 DEFA3P59666 94 aa13.81□□□□□ -0.2
HPS4-211ENST00000479064 IBA57Q5T440 356 aaKnown RBP13.81□□□□□ -0.2
HPS4-211ENST00000479064 FXYD5Q96DB9 178 aa13.81□□□□□ -0.2
HPS4-211ENST00000479064 UPK3BQ9BT76 320 aa13.81□□□□□ -0.2
HPS4-211ENST00000479064 ZNF492Q9P255 531 aa13.81□□□□□ -0.2
HPS4-211ENST00000479064 DYNC1H1Q14204 4646 aaKnown RBP13.81□□□□□ -0.2
HPS4-211ENST00000479064 CD300CQ08708 224 aa13.8□□□□□ -0.2
HPS4-211ENST00000479064 BTN1A1Q13410 526 aa13.8□□□□□ -0.2
HPS4-211ENST00000479064 Q6ZTI0 123 aa13.8□□□□□ -0.2
HPS4-211ENST00000479064 C6orf223Q8N319 242 aa13.8□□□□□ -0.2
HPS4-211ENST00000479064 ZFAND2AQ8N6M9 145 aa13.8□□□□□ -0.2
HPS4-211ENST00000479064 GSN-AS1Q9NRJ2 163 aa13.8□□□□□ -0.2
HPS4-211ENST00000479064 HSPB11Q9Y547 144 aa13.8□□□□□ -0.2
HPS4-211ENST00000479064 RBAKDNA6NC62 111 aa13.79□□□□□ -0.2
HPS4-211ENST00000479064 MPC2O95563 127 aa13.79□□□□□ -0.2
HPS4-211ENST00000479064 RNASE4P34096 147 aaKnown RBP13.79□□□□□ -0.2
HPS4-211ENST00000479064 TCL1AP56279 114 aa13.79□□□□□ -0.2
HPS4-211ENST00000479064 FAM122CQ6P4D5 195 aa13.79□□□□□ -0.2
HPS4-211ENST00000479064 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
HPS4-211ENST00000479064 SSNA1O43805 119 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
HPS4-211ENST00000479064 BTF3P20290 206 aaKnown RBP13.78□□□□□ -0.2
HPS4-211ENST00000479064 CSN1S1P47710 185 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 ZNF138P52744 262 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 TTC32Q5I0X7 151 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 VGLL1Q99990 258 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 KRTAP17-1Q9BYP8 105 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 Q9H8V8 135 aa13.78□□□□□ -0.2
HPS4-211ENST00000479064 TRGV2A0A075B6R0 118 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 A0A1W2PPQ1 181 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 OR7C2O60412 319 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 SPINK4O60575 86 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 OR10J4P0C629 311 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 TAS2R45P59539 299 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 PHYHIPLQ96FC7 376 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 LENEPQ9Y5L5 61 aa13.77□□□□□ -0.21
HPS4-211ENST00000479064 IGHV1OR15-1A0A075B7D0 117 aa13.76□□□□□ -0.21
HPS4-211ENST00000479064 A0A0J9YY99 117 aa13.76□□□□□ -0.21
HPS4-211ENST00000479064 RGS13O14921 159 aa13.76□□□□□ -0.21
HPS4-211ENST00000479064 IFNA5P01569 189 aa13.76□□□□□ -0.21
HPS4-211ENST00000479064 KHDC3LQ587J8 217 aa13.76□□□□□ -0.21
HPS4-211ENST00000479064 SCGB1C1Q8TD33 95 aa13.76□□□□□ -0.21
HPS4-211ENST00000479064 MRPS16Q9Y3D3 137 aaKnown RBP13.76□□□□□ -0.21
HPS4-211ENST00000479064 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
HPS4-211ENST00000479064 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
HPS4-211ENST00000479064 FFAR4Q5NUL3 377 aa13.75□□□□□ -0.21
HPS4-211ENST00000479064 Q9H3A6 140 aa13.75□□□□□ -0.21
HPS4-211ENST00000479064 RANP62826 216 aaKnown RBP13.74□□□□□ -0.21
HPS4-211ENST00000479064 UBE2L3P68036 154 aaKnown RBP13.74□□□□□ -0.21
HPS4-211ENST00000479064 ZNF266Q14584 549 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms