RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 IGHV3OR16-13A0A075B7E8 117 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 IGHV3-74A0A0B4J1X5 117 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 TRAV8-2A0A0B4J237 113 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 IGHV7-4-1A0A0J9YVY3 117 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 F2Z2F3 143 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 OVOL1O14753 267 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 IGHV3-11P01762 117 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 ELANEP08246 267 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 ARMS2P0C7Q2 107 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 IGFL4Q6B9Z1 124 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 UNQ9165/PRO28630Q6UXU0 137 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 Q6ZS46 218 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 RCHY1Q96PM5 261 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 UFC1Q9Y3C8 167 aa9.54□□□□□ -0.88
TRAF3IP3-213ENST00000478359 TRBV12-3P01733 135 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 PMCHP20382 165 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 CTRLP40313 264 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 FOXE3Q13461 319 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 CDPF1Q6NVV7 123 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 RNF182Q8N6D2 247 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 MAPK1IP1LQ8NDC0 245 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 Q8TAT8 98 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 NRN1Q9NPD7 142 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 IGHV3-49A0A0A0MS15 119 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 Q6ZWC4 215 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 FER1L6-AS1Q8NA97 138 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 AGPAT4-IT1Q9H0P7 198 aa9.53□□□□□ -0.88
TRAF3IP3-213ENST00000478359 TRBV7-9A0A0J9YWB2 115 aa9.52□□□□□ -0.89
TRAF3IP3-213ENST00000478359 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
TRAF3IP3-213ENST00000478359 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
TRAF3IP3-213ENST00000478359 Q71RC1 249 aaPredicted RBP9.52□□□□□ -0.89
TRAF3IP3-213ENST00000478359 CR1P17927 2039 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 LINC00587B1AMM8 73 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 PRAC2D3DTV9 90 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 SMAD7O15105 426 aaKnown RBP9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ORM1P02763 201 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ZNF80P51504 273 aaPredicted RBP9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ERCC8Q13216 396 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 IL17RELQ6ZVW7 336 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TMEM86BQ8N661 226 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 OR10J6PQ8NGY7 276 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TPPP3Q9BW30 176 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 RHPN1-AS1Q9BWJ2 59 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 SMPXQ9UHP9 88 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ANKRD17O75179 2603 aaKnown RBP9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 SPG11Q96JI7 2443 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 SOCS3O14543 225 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 NIT1Q86X76 327 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ZNF738Q8NE65 137 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
TRAF3IP3-213ENST00000478359 M0R2Z0 102 aa9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 HOXA3O43365 443 aaPredicted RBP9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 LINC00614P0C842 121 aa9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ZNF705DP0CH99 300 aaPredicted RBP9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ZNF705BP0CI00 300 aaPredicted RBP9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ID1P41134 155 aa9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 RNASEKQ6P5S7 137 aaKnown RBP9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 RNF152Q8N8N0 203 aa9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 MYOZ3Q8TDC0 251 aa9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 UBE2E2Q96LR5 201 aa9.5□□□□□ -0.89
TRAF3IP3-213ENST00000478359 VPS13CQ709C8 3753 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TMSB15BA0A087X1C1 80 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 OR5AL1P0C617 328 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 DDTP30046 118 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 RPL11P62913 178 aaKnown RBP9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 KRTAP1-3Q8IUG1 177 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 Q8N2B8 174 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ZNF664Q8N3J9 261 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 CSMD1Q96PZ7 3565 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 SVEP1Q4LDE5 3571 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 LGALS9O00182 355 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 LGALS1P09382 135 aaKnown RBP9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 NTF3P20783 257 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 DEFA6Q01524 100 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TMEM95Q3KNT9 176 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 FAM104BQ5XKR9 115 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TEX43Q6ZNM6 134 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 REC114Q7Z4M0 266 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TMEM191AQ9H0A3 160 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ZNF702PQ9H963 129 aa9.49□□□□□ -0.89
TRAF3IP3-213ENST00000478359 KRTDAPP60985 99 aa9.48□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
TRAF3IP3-213ENST00000478359 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
TRAF3IP3-213ENST00000478359 PPBPP02775 128 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 PRB4P10163 310 aaPredicted RBP9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TWIST1Q15672 202 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 FAM19A2Q8N3H0 131 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 TRAV21A0A0B4J279 112 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 CTAG1AP78358 180 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 CRYBG3Q68DQ2 2970 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 LAMTOR2Q9Y2Q5 125 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 U3KQK5 164 aa9.47□□□□□ -0.89
TRAF3IP3-213ENST00000478359 FBN2P35556 2912 aa9.46□□□□□ -0.89
TRAF3IP3-213ENST00000478359 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms