RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 RNASE6Q93091 150 aaKnown RBP11.61□□□□□ -0.55
U2AF1-210ENST00000478282 TTTY13Q9BZ97 58 aa11.61□□□□□ -0.55
U2AF1-210ENST00000478282 PKDREJQ9NTG1 2253 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 LEPP41159 167 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 IGSF10Q6WRI0 2623 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 RP1L1Q8IWN7 2480 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-210ENST00000478282 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-210ENST00000478282 COX7A1P24310 79 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 BMI1P35226 326 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 ZNF80P51504 273 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-210ENST00000478282 SAMD13Q5VXD3 122 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 VKORC1Q9BQB6 163 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 S4R3C0 116 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 K7ERJ3 54 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 GNG7O60262 68 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 VGLL1Q99990 258 aa11.6□□□□□ -0.55
U2AF1-210ENST00000478282 RALYQ9UKM9 306 aaKnown RBP11.6□□□□□ -0.55
U2AF1-210ENST00000478282 PPIAL4CA0A0B4J2A2 164 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 A0A1W2PRD5 423 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 A0A1W2PRF3 423 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 A0A1W2PRM7 423 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 IGKCP01834 107 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 PPIAL4GP0DN37 164 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 NXT2Q9NPJ8 142 aaKnown RBP11.59□□□□□ -0.55
U2AF1-210ENST00000478282 EVI2AP22794 236 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 ZNF575Q86XF7 245 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 Q8TAT8 98 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 DYNLRB1Q9NP97 96 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
U2AF1-210ENST00000478282 TRBV25-1A0A075B6N4 114 aa11.58□□□□□ -0.55
U2AF1-210ENST00000478282 A0A0G2JNJ9 132 aa11.58□□□□□ -0.55
U2AF1-210ENST00000478282 NPIPB5A8MRT5 1133 aa11.58□□□□□ -0.55
U2AF1-210ENST00000478282 VSTM5A8MXK1 200 aa11.58□□□□□ -0.55
U2AF1-210ENST00000478282 PRSS1P07477 247 aa11.58□□□□□ -0.55
U2AF1-210ENST00000478282 CNFNQ9BYD5 112 aa11.58□□□□□ -0.55
U2AF1-210ENST00000478282 Q9UFV3 132 aa11.58□□□□□ -0.55
U2AF1-210ENST00000478282 GAS8-AS1O95177 125 aa11.58□□□□□ -0.56
U2AF1-210ENST00000478282 LINC01559Q495D7 138 aa11.58□□□□□ -0.56
U2AF1-210ENST00000478282 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
U2AF1-210ENST00000478282 TM2D2Q9BX73 214 aa11.58□□□□□ -0.56
U2AF1-210ENST00000478282 KALRNO60229 2985 aa11.58□□□□□ -0.56
U2AF1-210ENST00000478282 SRSF2Q01130 221 aaKnown RBP11.58□□□□□ -0.56
U2AF1-210ENST00000478282 TNFRSF6BO95407 300 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 CEND1Q8N111 149 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 NHP2Q9NX24 153 aaKnown RBP11.57□□□□□ -0.56
U2AF1-210ENST00000478282 LY6LH3BQJ8 138 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 HLA-DRB4P13762 266 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 FOXC2Q99958 501 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 SMPXQ9UHP9 88 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 HLA-DRB4X5D2U9 266 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 DPM2O94777 84 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 RPL7P18124 248 aaKnown RBP11.57□□□□□ -0.56
U2AF1-210ENST00000478282 GTSCR1Q86UQ5 136 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 PSMG3-AS1Q96PY0 264 aa11.57□□□□□ -0.56
U2AF1-210ENST00000478282 TIMM23O14925 209 aa11.56□□□□□ -0.56
U2AF1-210ENST00000478282 ATP5LO75964 103 aa11.56□□□□□ -0.56
U2AF1-210ENST00000478282 TMEM11P17152 192 aa11.56□□□□□ -0.56
U2AF1-210ENST00000478282 MFAP4P55083 255 aa11.56□□□□□ -0.56
U2AF1-210ENST00000478282 ZNF48Q96MX3 618 aaPredicted RBP11.56□□□□□ -0.56
U2AF1-210ENST00000478282 BBC3Q96PG8 261 aaPredicted RBP11.56□□□□□ -0.56
U2AF1-210ENST00000478282 ZC2HC1BQ5TFG8 222 aa11.56□□□□□ -0.56
U2AF1-210ENST00000478282 E9PLD3 99 aa11.55□□□□□ -0.56
U2AF1-210ENST00000478282 NBR2O15453 112 aa11.55□□□□□ -0.56
U2AF1-210ENST00000478282 ORM1P02763 201 aa11.55□□□□□ -0.56
U2AF1-210ENST00000478282 SCGB1A1P11684 91 aa11.55□□□□□ -0.56
U2AF1-210ENST00000478282 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
U2AF1-210ENST00000478282 TMEM158Q8WZ71 300 aa11.55□□□□□ -0.56
U2AF1-210ENST00000478282 F8W735 103 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-210ENST00000478282 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
U2AF1-210ENST00000478282 AZU1P20160 251 aa11.55□□□□□ -0.56
U2AF1-210ENST00000478282 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
U2AF1-210ENST00000478282 ATRXP46100 2492 aa11.54□□□□□ -0.56
U2AF1-210ENST00000478282 CFAP46Q8IYW2 2715 aa11.54□□□□□ -0.56
U2AF1-210ENST00000478282 IGHG4P01861 327 aa11.54□□□□□ -0.56
U2AF1-210ENST00000478282 SIGMAR1Q99720 223 aa11.54□□□□□ -0.56
U2AF1-210ENST00000478282 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
U2AF1-210ENST00000478282 IGLL5B9A064 214 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 F8W1H4 67 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 GATA1P15976 413 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-210ENST00000478282 HLA-DMBP28068 263 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 CLEC2AQ6UVW9 174 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 Q8N8P6 123 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 SPANXB1Q9NS25 103 aaPredicted RBP11.53□□□□□ -0.56
U2AF1-210ENST00000478282 FABP5P3A8MUU1 101 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 FBXL19-AS1Q494R0 122 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 IGFL4Q6B9Z1 124 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 FOXI2Q6ZQN5 318 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 E7EQL1 145 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 GOSR1O95249 250 aa11.53□□□□□ -0.56
U2AF1-210ENST00000478282 IGLV2-18A0A075B6J9 118 aa11.52□□□□□ -0.56
U2AF1-210ENST00000478282 NDUFA3O95167 84 aa11.52□□□□□ -0.56
U2AF1-210ENST00000478282 TMEM160Q9NX00 188 aa11.52□□□□□ -0.56
U2AF1-210ENST00000478282 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.56
U2AF1-210ENST00000478282 TSSC4Q9Y5U2 329 aaPredicted RBP11.52□□□□□ -0.56
U2AF1-210ENST00000478282 ADORA2A-AS1P86434 159 aa11.52□□□□□ -0.57
U2AF1-210ENST00000478282 WFDC2Q14508 124 aa11.52□□□□□ -0.57
U2AF1-210ENST00000478282 TAL2Q16559 108 aa11.52□□□□□ -0.57
U2AF1-210ENST00000478282 CD300EQ496F6 205 aaPredicted RBP11.52□□□□□ -0.57
U2AF1-210ENST00000478282 NPBQ8NG41 125 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms