RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	CCDC88C	Q9P219	2028 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	DISP2	A7MBM2	1401 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334		H3BRM9	83 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334		K7ERU9	68 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	EDF1	O60869	148 aa	Known RBP	1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	RBP4	P02753	201 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	PRB1	P04280	392 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	SLC25A5	P05141	298 aa	Known RBP	1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	COX7C	P15954	63 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	KDELR1	P24390	212 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	BLCAP	P62952	87 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	ZNF563	Q8TA94	476 aa		1.44	□□□□□ -2.18
RBM39-231	ENST00000477334	SCN8A	Q9UQD0	1980 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	PRRC2B	Q5JSZ5	2229 aa	Known RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	ANAPC1	Q9H1A4	1944 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	LOC107984156	A0A0G2JMH3	177 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	EFCAB10	A6NFE3	127 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	BBIP1	A8MTZ0	92 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	YPEL1	O60688	119 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	MRPS14	O60783	128 aa	Known RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	DNAL4	O96015	105 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	SLC25A4	P12235	298 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	RNASE3	P12724	160 aa	Known RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	IL9	P15248	144 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	SNRPD3	P62318	126 aa	Known RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	QRFP	P83859	136 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	ARL17A	Q8IVW1	177 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	CTAGE3P	Q8IX95	158 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334		Q8N2B8	174 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334		Q8TAT8	98 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	ZNF625	Q96I27	306 aa	Predicted RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	SMIM7	Q9BQ49	75 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	SLC35B3	Q9H1N7	401 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	CDC42SE1	Q9NRR8	79 aa		1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	MYO5A	Q9Y4I1	1855 aa	Known RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	COL1A1	P02452	1464 aa	Predicted RBP	1.43	□□□□□ -2.18
RBM39-231	ENST00000477334	CCL16	O15467	120 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	SULT1C4	O75897	302 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	HLA-DRB4	P13762	266 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	NEDD8	Q15843	81 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	OR10AG1	Q8NH19	301 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	PATE1	Q8WXA2	126 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	LINC00052	Q96N35	136 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	CIB3	Q96Q77	187 aa	Predicted RBP	1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	NABP2	Q9BQ15	211 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	LPAR5	Q9H1C0	372 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	COMMD3	Q9UBI1	195 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	METTL1	Q9UBP6	276 aa	Known RBP	1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	TNFSF18	Q9UNG2	199 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	HLA-DRB4	X5D2U9	266 aa		1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	XIRP1	Q702N8	1843 aa	Known RBP	1.42	□□□□□ -2.18
RBM39-231	ENST00000477334	FER1L6	Q2WGJ9	1857 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	EML6	Q6ZMW3	1958 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	VIRMA	Q69YN4	1812 aa	Known RBP	1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	MYLK	Q15746	1914 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	IGHV1-24	A0A0C4DH33	117 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	IGKV3D-7	A0A0C4DH55	119 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	IGKV3OR2-268	A0A0C4DH90	116 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	TRBV6-4	A0A1B0GX49	114 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	IFITM5	A6NNB3	132 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	NDUFA2	O43678	99 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	TPST1	O60507	370 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	NCR2	O95944	276 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	IGKV2D-40	P01614	121 aa	Predicted RBP	1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	AKR1D1	P51857	326 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	DNAJB13	P59910	316 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	NUMA1	Q14980	2115 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	MPV17L	Q2QL34	196 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	GLYATL3	Q5SZD4	288 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	TMEM91	Q6ZNR0	172 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	C10orf111	Q8N326	155 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	OR10AC1	Q8NH08	325 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	OTOS	Q8NHW6	89 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	MPC1	Q9Y5U8	109 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	BICRA	Q9NZM4	1560 aa		1.41	□□□□□ -2.18
RBM39-231	ENST00000477334	MGAM	O43451	1857 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	COL4A5	P29400	1685 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	IGKV2-29	A2NJV5	120 aa	Predicted RBP	1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	GEMIN2	O14893	280 aa	Known RBP	1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	HCRT	O43612	131 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	COPZ1	P61923	177 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	CNBP	P62633	177 aa	Known RBP	1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	RPS25	P62851	125 aa	Known RBP	1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	PLGLB1	Q02325	96 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	MIR22HG	Q0VDD5	57 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	ASB16-AS1	Q495Z4	193 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	CLLU1	Q5K131	121 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	FOXI2	Q6ZQN5	318 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	C3orf62	Q6ZUJ4	267 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	LINC00269	Q8N2A0	174 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	FAM19A2	Q8N3H0	131 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	ARL11	Q969Q4	196 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	TMEM14C	Q9P0S9	112 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	FGD6	Q6ZV73	1430 aa		1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	PRG4	Q92954	1404 aa	Predicted RBP	1.4	□□□□□ -2.19
RBM39-231	ENST00000477334	MYH10	P35580	1976 aa		1.39	□□□□□ -2.19
RBM39-231	ENST00000477334		A0A0C4DFX4	3053 aa		1.39	□□□□□ -2.19

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