RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 C11orf45Q8TAV5 145 aa12.48□□□□□ -0.41
SMARCD3-210ENST00000477169 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
SMARCD3-210ENST00000477169 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
SMARCD3-210ENST00000477169 CSNK1G2-AS1Q8NCQ2 148 aa12.47□□□□□ -0.41
SMARCD3-210ENST00000477169 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
SMARCD3-210ENST00000477169 IGKV2-40A0A087WW87 121 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-210ENST00000477169 IGKV2D-40P01614 121 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-210ENST00000477169 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.41
SMARCD3-210ENST00000477169 CSN1S1P47710 185 aa12.46□□□□□ -0.41
SMARCD3-210ENST00000477169 ERCC8Q13216 396 aa12.46□□□□□ -0.41
SMARCD3-210ENST00000477169 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
SMARCD3-210ENST00000477169 C1QTNF4Q9BXJ3 329 aa12.46□□□□□ -0.41
SMARCD3-210ENST00000477169 M0R2Z0 102 aa12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 CT45A10P0DMU9 189 aa12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 NANOS2P60321 138 aaKnown RBP12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 SPINK13Q1W4C9 94 aa12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 VGLL1Q99990 258 aa12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 PPP1R14DQ9NXH3 145 aa12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
SMARCD3-210ENST00000477169 A0A1B0GV50 99 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 GGTLC3B5MD39 225 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 DIRC3C9JPN6 131 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 DEFB4AO15263 64 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 AMBPP02760 352 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 SLC25A5P05141 298 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 UBE2G2P60604 165 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 SUMO1P63165 101 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 ALKAL2Q6UX46 152 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 ARL6IP6Q8N6S5 226 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 Q8NAQ8 132 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 CMTM2Q8TAZ6 248 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
SMARCD3-210ENST00000477169 RBAKDNA6NC62 111 aa12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 FAM74A7A6NL05 159 aa12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 CRXO43186 299 aaPredicted RBP12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 MIFP14174 115 aa12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 GNG5P63218 68 aa12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 ODF3Q96PU9 254 aa12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 RPH3ALQ9UNE2 315 aa12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 KMT2AQ03164 3969 aa12.43□□□□□ -0.42
SMARCD3-210ENST00000477169 TRAV1-1A0A0B4J248 108 aa12.42□□□□□ -0.42
SMARCD3-210ENST00000477169 ZNF705EA8MWA4 302 aaPredicted RBP12.42□□□□□ -0.42
SMARCD3-210ENST00000477169 LGALS9CQ6DKI2 356 aa12.42□□□□□ -0.42
SMARCD3-210ENST00000477169 C5orf17Q8NAS9 161 aa12.42□□□□□ -0.42
SMARCD3-210ENST00000477169 IGF2BP2-AS1Q96M15 143 aa12.42□□□□□ -0.42
SMARCD3-210ENST00000477169 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 CDKN1BP46527 198 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 CCL20P78556 96 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 TMEM78Q5T7P6 136 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 GOLT1AQ6ZVE7 132 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 FAM19A4Q96LR4 140 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 EPDR1Q9UM22 224 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 X6R8D5 127 aa12.41□□□□□ -0.42
SMARCD3-210ENST00000477169 IGHV4-28A0A0C4DH34 117 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 C11orf94C9JXX5 98 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 RBMY1A1P0DJD3 496 aaKnown RBP12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 RBMY1CP0DJD4 496 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 TSPOP30536 169 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 LEPP41159 167 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 ZNF138P52744 262 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 TCTAP57738 103 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 KIR3DS1Q14943 382 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 RBMY1FQ15415 496 aaKnown RBP12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 ZNF705AQ6ZN79 300 aaPredicted RBP12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 C2CD4CQ8TF44 421 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 ARL2-SNX15V9GYD0 113 aa12.4□□□□□ -0.42
SMARCD3-210ENST00000477169 PAGE4O60829 102 aa12.39□□□□□ -0.43
SMARCD3-210ENST00000477169 INSP01308 110 aa12.39□□□□□ -0.43
SMARCD3-210ENST00000477169 HBE1P02100 147 aa12.39□□□□□ -0.43
SMARCD3-210ENST00000477169 TCRAP04437 139 aa12.39□□□□□ -0.43
SMARCD3-210ENST00000477169 Q8TAT8 98 aa12.39□□□□□ -0.43
SMARCD3-210ENST00000477169 SERTM2A0A1B0GWG4 89 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 TEX46H3BTG2 121 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 IFNA7P01567 189 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 CRISP2P16562 243 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 PPT1P50897 306 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 CST9LP1Q5W188 147 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 CCDC28AQ8IWP9 274 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 GOLT1BQ9Y3E0 138 aa12.38□□□□□ -0.43
SMARCD3-210ENST00000477169 IGHV3OR16-12A0A075B7B8 117 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 TRAV8-1A0A0A6YYK1 113 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 J3KRW8 73 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 ATP5G3P48201 142 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
SMARCD3-210ENST00000477169 TRBV7-9A0A0J9YWB2 115 aa12.36□□□□□ -0.43
SMARCD3-210ENST00000477169 KLLNB2CW77 178 aa12.36□□□□□ -0.43
SMARCD3-210ENST00000477169 NMBP08949 121 aa12.36□□□□□ -0.43
SMARCD3-210ENST00000477169 BLOC1S1P78537 153 aa12.36□□□□□ -0.43
SMARCD3-210ENST00000477169 CYB561D1Q8N8Q1 229 aa12.36□□□□□ -0.43
SMARCD3-210ENST00000477169 NEU1Q99519 415 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms