RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 ZNF253O75346 499 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 CT45A10P0DMU9 189 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 SLURP1P55000 103 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 NUP35Q8NFH5 326 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 C20orf173Q96LM9 149 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 PRR25Q96S07 402 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 RPP21Q9H633 154 aaKnown RBP5.04□□□□□ -1.6
CCDC30-209ENST00000477155 C19orf71A6NCJ1 209 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 C5orf52A6NGY3 159 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 SNURFLB1AK76 121 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 J3KRW8 73 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 TYMSP04818 313 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 CAMPP49913 170 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 ZNF738Q8NE65 137 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 OR11H1Q8NG94 326 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 SMIM12Q96EX1 92 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 PGLYRP4Q96LB8 373 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 TPPP3Q9BW30 176 aa5.04□□□□□ -1.6
CCDC30-209ENST00000477155 TMEM213A2RRL7 107 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 PHOX2AO14813 284 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 KIAA1644Q3SXP7 199 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 TSKUQ8WUA8 353 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 AGPAT4-IT1Q9H0P7 198 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 A8MWL6 223 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 F6UB75 175 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 ZNF80P51504 273 aaPredicted RBP5.03□□□□□ -1.6
CCDC30-209ENST00000477155 ACTL10Q5JWF8 245 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 KLHL30-AS1Q8NEE0 82 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 MYOZ3Q8TDC0 251 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 ZNF418Q8TF45 676 aaPredicted RBP5.03□□□□□ -1.6
CCDC30-209ENST00000477155 GTSF1Q8WW33 167 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 DPF1Q92782 380 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 NRN1Q9NPD7 142 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 NAT8BQ9UHF3 227 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 UFC1Q9Y3C8 167 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 IZUMO1RA6ND01 250 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 SAPCD1Q5SSQ6 148 aa5.03□□□□□ -1.6
CCDC30-209ENST00000477155 MRPL18Q9H0U6 180 aaKnown RBP5.03□□□□□ -1.6
CCDC30-209ENST00000477155 NIPBLQ6KC79 2804 aaeCLIP5.02□□□□□ -1.61
CCDC30-209ENST00000477155 MUC21A0A0G2JKD1 596 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 MUC21A0A140T8X8 626 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 SERTM2A0A1B0GWG4 89 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 INAFM1C9JVW0 142 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 K7EMT4 169 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 CDX1P47902 265 aaPredicted RBP5.02□□□□□ -1.61
CCDC30-209ENST00000477155 MUC21Q5SSG8 566 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 TMEM78Q5T7P6 136 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 WFDC12Q8WWY7 111 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 ZNF492Q9P255 531 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 TRBV6-1A0A0K0K1D8 114 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 A0A1B0GUS0 222 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 GRIFINA4D1Z8 144 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 SH2D1AO60880 128 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 RNF152Q8N8N0 203 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 LINC01006Q8NI28 216 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 NDFIP1Q9BT67 221 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 SSBP4Q9BWG4 385 aaPredicted RBP5.02□□□□□ -1.61
CCDC30-209ENST00000477155 C2CD3Q4AC94 2353 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 XKRY2A2RUG3 117 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 ORM1P02763 201 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 CD28P10747 220 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 MEOX2P50222 304 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 SMUG1Q53HV7 270 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 Q6ZQT7 251 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 OR1N2Q8NGR9 330 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 AGRNO00468 2067 aa5.02□□□□□ -1.61
CCDC30-209ENST00000477155 NSD1Q96L73 2696 aaPredicted RBP5.02□□□□□ -1.61
CCDC30-209ENST00000477155 F8P00451 2351 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 TRAV9-1A0A075B6T8 112 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 CD33P20138 364 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 HIST1H1AQ02539 215 aaPredicted RBP5.01□□□□□ -1.61
CCDC30-209ENST00000477155 FAM162BQ5T6X4 162 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 NOTCH3Q9UM47 2321 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 TMEM189A5PLL7 270 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 C2orf70A6NJV1 201 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 LINC01619G3V211 115 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 SOCS3O14543 225 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 RNASE1P07998 156 aaKnown RBP5.01□□□□□ -1.61
CCDC30-209ENST00000477155 ZNF688P0C7X2 276 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 ZNF138P52744 262 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 SCGB2A2Q13296 93 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 GDF5OSQ5U4N7 250 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 TMEM136Q6ZRR5 245 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 DLX4Q92988 240 aaPredicted RBP5.01□□□□□ -1.61
CCDC30-209ENST00000477155 MS4A6AQ9H2W1 248 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 NPIPB6E9PJ23 425 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 UBE2CO00762 179 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 HOXA5P20719 270 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 HILS1P60008 231 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 KLF5Q13887 457 aaPredicted RBP5.01□□□□□ -1.61
CCDC30-209ENST00000477155 ARL6IP6Q8N6S5 226 aa5.01□□□□□ -1.61
CCDC30-209ENST00000477155 CITED2Q99967 270 aaPredicted RBP5.01□□□□□ -1.61
CCDC30-209ENST00000477155 IGKV3-20P01619 116 aa5□□□□□ -1.61
CCDC30-209ENST00000477155 RBPMS2Q6ZRY4 209 aaKnown RBP5□□□□□ -1.61
CCDC30-209ENST00000477155 OR10J6PQ8NGY7 276 aa5□□□□□ -1.61
CCDC30-209ENST00000477155 C4orf3Q8WVX3 66 aa5□□□□□ -1.61
CCDC30-209ENST00000477155 GNB1LQ9BYB4 327 aa5□□□□□ -1.61
CCDC30-209ENST00000477155 RBAKDNA6NC62 111 aa5□□□□□ -1.61
CCDC30-209ENST00000477155 FABP5P3A8MUU1 101 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms