RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 OXTP01178 125 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 HOXB5P09067 269 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 GYPEP15421 78 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 VAMP1P23763 118 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
BRCA1-213ENST00000476777 KRTAP10-4P60372 401 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-213ENST00000476777 POLR2GP62487 172 aaKnown RBP eCLIP7.57□□□□□ -1.2
BRCA1-213ENST00000476777 ID3Q02535 119 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 ERCC8Q13216 396 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 DIRAS2Q96HU8 199 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 PSENENQ9NZ42 101 aa7.57□□□□□ -1.2
BRCA1-213ENST00000476777 RABL2AQ9UBK7 228 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-213ENST00000476777 RCL1Q9Y2P8 373 aaKnown RBP7.57□□□□□ -1.2
BRCA1-213ENST00000476777 TRGV4A0A0C4DH28 118 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 GOSR2O14653 212 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 AGPAT2O15120 278 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 COX7A2P2O60397 106 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 SFT2D2O95562 160 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 ZNF415Q09FC8 603 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 TMEM14EPQ6UXP3 125 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 Q6ZQT7 251 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 ZNF546Q86UE3 836 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
BRCA1-213ENST00000476777 CCDC59Q9P031 241 aaKnown RBP7.56□□□□□ -1.2
BRCA1-213ENST00000476777 RNF213Q63HN8 5207 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 LRP2P98164 4655 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 TRAV5A0A0B4J249 113 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 IGHV3-38A0A0C4DH36 116 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 IBA57-AS1B1ANH7 110 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 M0R3E3 92 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 RGS13O14921 159 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 OR4E1P0C645 316 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 SFTA3P0C7M3 94 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 METTL15P1P0C7V9 234 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 CRISP2P16562 243 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 PPP1R1AQ13522 171 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 GUK1Q16774 197 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 LINC01556Q5JQF7 62 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 C10orf113Q5VZT2 155 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 PCNPQ8WW12 178 aaKnown RBP7.55□□□□□ -1.2
BRCA1-213ENST00000476777 MRPL53Q96EL3 112 aaKnown RBP7.55□□□□□ -1.2
BRCA1-213ENST00000476777 ZNF479Q96JC4 524 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 SMIM8Q96KF7 97 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 LINC00477Q96M19 166 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 AGPAT4-IT1Q9H0P7 198 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 MGAT4CQ9UBM8 478 aa7.55□□□□□ -1.2
BRCA1-213ENST00000476777 IGHV1OR15-1A0A075B7D0 117 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 SSSCA1O60232 199 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 ZNF253O75346 499 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 ORM1P02763 201 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 GPX1P07203 203 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 NMBP08949 121 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 WFDC2Q14508 124 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 PRR9Q5T870 116 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 ZFAND2AQ8N6M9 145 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 OR10P1Q8NGE3 313 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 MGST2Q99735 147 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 TXNDC17Q9BRA2 123 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 Q9HAA7 133 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
BRCA1-213ENST00000476777 TIRAPP58753 221 aa7.53□□□□□ -1.2
BRCA1-213ENST00000476777 ARL16Q0P5N6 197 aa7.53□□□□□ -1.2
BRCA1-213ENST00000476777 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
BRCA1-213ENST00000476777 OR10G4Q8NGN3 311 aa7.53□□□□□ -1.2
BRCA1-213ENST00000476777 BLNKQ8WV28 456 aa7.53□□□□□ -1.2
BRCA1-213ENST00000476777 ARPC5LQ9BPX5 153 aa7.53□□□□□ -1.2
BRCA1-213ENST00000476777 DNAJC4Q9NNZ3 241 aa7.53□□□□□ -1.2
BRCA1-213ENST00000476777 RSL24D1Q9UHA3 163 aaKnown RBP7.53□□□□□ -1.2
BRCA1-213ENST00000476777 TRBV19A0A075B6N1 114 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 C9JCJ5 164 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 NDUFB4O95168 129 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 SPCS2Q15005 226 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 C9orf47Q6ZRZ4 202 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 RAB2BQ8WUD1 216 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 RASL10AQ92737 203 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 SOSTQ9BQB4 213 aa7.52□□□□□ -1.21
BRCA1-213ENST00000476777 LOC100131303A0A0U1RQF7 123 aa7.51□□□□□ -1.21
BRCA1-213ENST00000476777 FAUP35544 74 aaKnown RBP7.51□□□□□ -1.21
BRCA1-213ENST00000476777 SH2D6Q7Z4S9 175 aa7.51□□□□□ -1.21
BRCA1-213ENST00000476777 SLC25A21Q9BQT8 299 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-213ENST00000476777 GGACTQ9BVM4 153 aa7.51□□□□□ -1.21
BRCA1-213ENST00000476777 PRELID1Q9Y255 219 aa7.51□□□□□ -1.21
BRCA1-213ENST00000476777 TSC22D2O75157 780 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 TAS2R30P59541 319 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 MIC13Q5XKP0 118 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 Q6ZRG5 221 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 MCFD2Q8NI22 146 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 TRIM63Q969Q1 353 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 SRRQ9GZT4 340 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 SLC25A31Q9H0C2 315 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 ZNF492Q9P255 531 aa7.5□□□□□ -1.21
BRCA1-213ENST00000476777 IGKV2-40A0A087WW87 121 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-213ENST00000476777 TRAV4A0A0B4J268 109 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 C9orf170A2RU37 121 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 IGKV2D-40P01614 121 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-213ENST00000476777 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 IGHV3-33P01772 117 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 IGHV3-30-3P0DP02 117 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms