RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 H2AFB1P0C5Y9 115 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 SULT1A2P50226 295 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 ZNF705AQ6ZN79 300 aaPredicted RBP21.46■■□□□ 1.03
HOXB3-208ENST00000476342 C5orf17Q8NAS9 161 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 RPH3ALQ9UNE2 315 aa21.46■■□□□ 1.03
HOXB3-208ENST00000476342 TRAV12-2A0A075B6T6 113 aa21.45■■□□□ 1.02
HOXB3-208ENST00000476342 MIFP14174 115 aa21.45■■□□□ 1.02
HOXB3-208ENST00000476342 VGLL1Q99990 258 aa21.45■■□□□ 1.02
HOXB3-208ENST00000476342 IGHV3OR16-12A0A075B7B8 117 aa21.44■■□□□ 1.02
HOXB3-208ENST00000476342 SUMO1P63165 101 aaKnown RBP21.44■■□□□ 1.02
HOXB3-208ENST00000476342 TMEM208Q9BTX3 173 aa21.44■■□□□ 1.02
HOXB3-208ENST00000476342 NKX6-2Q9C056 277 aaPredicted RBP21.44■■□□□ 1.02
HOXB3-208ENST00000476342 X6R8D5 127 aa21.44■■□□□ 1.02
HOXB3-208ENST00000476342 UBE2G2P60604 165 aa21.43■■□□□ 1.02
HOXB3-208ENST00000476342 A0A0J9YWU9 116 aa21.42■■□□□ 1.02
HOXB3-208ENST00000476342 SERTM2A0A1B0GWG4 89 aa21.42■■□□□ 1.02
HOXB3-208ENST00000476342 GGTLC3B5MD39 225 aa21.42■■□□□ 1.02
HOXB3-208ENST00000476342 C1orf158Q8N1D5 194 aa21.42■■□□□ 1.02
HOXB3-208ENST00000476342 NEU1Q99519 415 aa21.42■■□□□ 1.02
HOXB3-208ENST00000476342 ZNF492Q9P255 531 aa21.42■■□□□ 1.02
HOXB3-208ENST00000476342 ZNF138P52744 262 aa21.41■■□□□ 1.02
HOXB3-208ENST00000476342 GOLT1AQ6ZVE7 132 aa21.41■■□□□ 1.02
HOXB3-208ENST00000476342 C11orf68Q9H3H3 251 aaKnown RBP21.41■■□□□ 1.02
HOXB3-208ENST00000476342 SMIM9A6NGZ8 99 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 FAM74A7A6NL05 159 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 TEX46H3BTG2 121 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 GNG5P63218 68 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 TMEM256Q8N2U0 113 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 Q8NAQ8 132 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 C20orf144Q9BQM9 153 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 BOLA1Q9Y3E2 137 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 YTHDF2Q9Y5A9 579 aaKnown RBP21.4■■□□□ 1.02
HOXB3-208ENST00000476342 ARL2-SNX15V9GYD0 113 aa21.4■■□□□ 1.02
HOXB3-208ENST00000476342 A0A1B0GV50 99 aa21.39■■□□□ 1.02
HOXB3-208ENST00000476342 K7EQM0 130 aa21.39■■□□□ 1.02
HOXB3-208ENST00000476342 FAM19A4Q96LR4 140 aa21.39■■□□□ 1.02
HOXB3-208ENST00000476342 IGHV4-28A0A0C4DH34 117 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 TRBV7-9A0A0J9YWB2 115 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 J3KRW8 73 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 TCRAP04437 139 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 GFI1BQ5VTD9 330 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 EPDR1Q9UM22 224 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 NMBP08949 121 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 CRISP2P16562 243 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 PPT1P50897 306 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 Q8TAT8 98 aa21.38■■□□□ 1.01
HOXB3-208ENST00000476342 IFNA7P01567 189 aa21.37■■□□□ 1.01
HOXB3-208ENST00000476342 HBE1P02100 147 aa21.37■■□□□ 1.01
HOXB3-208ENST00000476342 KIR3DS1Q14943 382 aa21.37■■□□□ 1.01
HOXB3-208ENST00000476342 ALKAL2Q6UX46 152 aa21.37■■□□□ 1.01
HOXB3-208ENST00000476342 LENEPQ9Y5L5 61 aa21.37■■□□□ 1.01
HOXB3-208ENST00000476342 KLLNB2CW77 178 aa21.36■■□□□ 1.01
HOXB3-208ENST00000476342 ATG101Q9BSB4 218 aa21.36■■□□□ 1.01
HOXB3-208ENST00000476342 TRAV1-1A0A0B4J248 108 aa21.35■■□□□ 1.01
HOXB3-208ENST00000476342 GPX1P07203 203 aa21.35■■□□□ 1.01
HOXB3-208ENST00000476342 RBMY1A1P0DJD3 496 aaKnown RBP21.35■■□□□ 1.01
HOXB3-208ENST00000476342 RBMY1CP0DJD4 496 aa21.35■■□□□ 1.01
HOXB3-208ENST00000476342 RBMY1FQ15415 496 aaKnown RBP21.35■■□□□ 1.01
HOXB3-208ENST00000476342 RRN3P1Q2M238 152 aa21.35■■□□□ 1.01
HOXB3-208ENST00000476342 CST9LP1Q5W188 147 aa21.35■■□□□ 1.01
HOXB3-208ENST00000476342 CYB561D1Q8N8Q1 229 aa21.35■■□□□ 1.01
HOXB3-208ENST00000476342 LINC01587Q99440 93 aa21.35■■□□□ 1.01
HOXB3-208ENST00000476342 C7orf71A4D174 169 aa21.34■■□□□ 1.01
HOXB3-208ENST00000476342 DEFB4AO15263 64 aa21.34■■□□□ 1.01
HOXB3-208ENST00000476342 NIPSNAP3BQ9BS92 247 aa21.34■■□□□ 1.01
HOXB3-208ENST00000476342 DNAH7Q8WXX0 4024 aa21.33■■□□□ 1.01
HOXB3-208ENST00000476342 H7BYZ3 331 aa21.33■■□□□ 1.01
HOXB3-208ENST00000476342 PAGE4O60829 102 aa21.33■■□□□ 1.01
HOXB3-208ENST00000476342 ZFAND2AQ8N6M9 145 aa21.33■■□□□ 1.01
HOXB3-208ENST00000476342 HIST1H2BAQ96A08 127 aa21.33■■□□□ 1.01
HOXB3-208ENST00000476342 TCEAL7Q9BRU2 100 aa21.33■■□□□ 1.01
HOXB3-208ENST00000476342 TRAV8-1A0A0A6YYK1 113 aa21.32■■□□□ 1
HOXB3-208ENST00000476342 TRAV12-3A0A0B4J271 114 aa21.32■■□□□ 1
HOXB3-208ENST00000476342 IL17DQ8TAD2 202 aa21.32■■□□□ 1
HOXB3-208ENST00000476342 TMEM189A5PLL7 270 aa21.31■■□□□ 1
HOXB3-208ENST00000476342 FBLL1A6NHQ2 334 aaKnown RBP21.31■■□□□ 1
HOXB3-208ENST00000476342 TAS2R60P59551 318 aa21.31■■□□□ 1
HOXB3-208ENST00000476342 TMEM75Q8N9X5 138 aa21.31■■□□□ 1
HOXB3-208ENST00000476342 MUC7Q8TAX7 377 aa21.31■■□□□ 1
HOXB3-208ENST00000476342 F6UZH7 168 aa21.3■■□□□ 1
HOXB3-208ENST00000476342 PEX7O00628 323 aa21.3■■□□□ 1
HOXB3-208ENST00000476342 RNASE4P34096 147 aaKnown RBP21.3■■□□□ 1
HOXB3-208ENST00000476342 BTN1A1Q13410 526 aa21.3■■□□□ 1
HOXB3-208ENST00000476342 NDFIP1Q9BT67 221 aa21.3■■□□□ 1
HOXB3-208ENST00000476342 MANBALQ9NQG1 85 aa21.3■■□□□ 1
HOXB3-208ENST00000476342 LOC102723971A0A1B0GUV8 181 aa21.29■■□□□ 1
HOXB3-208ENST00000476342 CCDC28AQ8IWP9 274 aa21.29■■□□□ 1
HOXB3-208ENST00000476342 ZNF705GA8MUZ8 300 aaPredicted RBP21.29■■□□□ 1
HOXB3-208ENST00000476342 ATP5G3P48201 142 aa21.29■■□□□ 1
HOXB3-208ENST00000476342 SGK494Q96LW2 274 aa21.29■■□□□ 1
HOXB3-208ENST00000476342 GNG13Q9P2W3 67 aa21.29■■□□□ 1
HOXB3-208ENST00000476342 BLOC1S1P78537 153 aa21.28■■□□□ 1
HOXB3-208ENST00000476342 CCL20P78556 96 aa21.28■■□□□ 1
HOXB3-208ENST00000476342 FLI1Q01543 452 aaPredicted RBP21.28■■□□□ 1
HOXB3-208ENST00000476342 PSG8Q9UQ74 426 aa21.28■■□□□ 1
HOXB3-208ENST00000476342 HTN1P15515 57 aa21.27■■□□□ 1
HOXB3-208ENST00000476342 PRR9Q5T870 116 aa21.27■■□□□ 1
HOXB3-208ENST00000476342 C11orf45Q8TAV5 145 aa21.27■■□□□ 1
HOXB3-208ENST00000476342 PYGO2Q9BRQ0 406 aa21.27■■□□□ 1
HOXB3-208ENST00000476342 TREM1Q9NP99 234 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms