RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-217ENST00000475693 TMEM213A2RRL7 107 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 NBEAP1P0C6P0 100 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 TP53TG3Q9ULZ0 132 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 U3KQE9 123 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 CCL24O00175 119 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 CRISP2P16562 243 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 BPIFA4PQ86YQ2 179 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 GNB1LQ9BYB4 327 aa13.74□□□□□ -0.21
ATG4B-217ENST00000475693 DAZ1Q9NQZ3 744 aaKnown RBP13.74□□□□□ -0.21
ATG4B-217ENST00000475693 GGTLC3B5MD39 225 aa13.73□□□□□ -0.21
ATG4B-217ENST00000475693 MT-ND6P03923 174 aa13.73□□□□□ -0.21
ATG4B-217ENST00000475693 ADAMTSL5Q6ZMM2 481 aa13.73□□□□□ -0.21
ATG4B-217ENST00000475693 EXOC3-AS1Q8N2X6 119 aa13.73□□□□□ -0.21
ATG4B-217ENST00000475693 MRPL18Q9H0U6 180 aaKnown RBP13.73□□□□□ -0.21
ATG4B-217ENST00000475693 IGLC2P0DOY2 106 aa13.72□□□□□ -0.21
ATG4B-217ENST00000475693 SUMO1P63165 101 aaKnown RBP13.72□□□□□ -0.21
ATG4B-217ENST00000475693 IGHV7-4-1A0A0J9YVY3 117 aa13.72□□□□□ -0.21
ATG4B-217ENST00000475693 K7EN84 100 aa13.72□□□□□ -0.21
ATG4B-217ENST00000475693 LINC00310P59036 64 aa13.72□□□□□ -0.21
ATG4B-217ENST00000475693 Q6ZWC4 215 aa13.72□□□□□ -0.21
ATG4B-217ENST00000475693 TMEM167BQ9NRX6 74 aa13.72□□□□□ -0.21
ATG4B-217ENST00000475693 ZNF705FA8MVS1 300 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-217ENST00000475693 CHEK1O14757 476 aa13.71□□□□□ -0.21
ATG4B-217ENST00000475693 ZNF705DP0CH99 300 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-217ENST00000475693 ZNF705BP0CI00 300 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-217ENST00000475693 HLA-DMBP28068 263 aa13.71□□□□□ -0.21
ATG4B-217ENST00000475693 TMEM183BQ1AE95 376 aa13.71□□□□□ -0.21
ATG4B-217ENST00000475693 MIEN1Q9BRT3 115 aa13.71□□□□□ -0.21
ATG4B-217ENST00000475693 SMPXQ9UHP9 88 aa13.71□□□□□ -0.21
ATG4B-217ENST00000475693 A0A1B0GUS0 222 aa13.71□□□□□ -0.22
ATG4B-217ENST00000475693 RPL11P62913 178 aaKnown RBP13.71□□□□□ -0.22
ATG4B-217ENST00000475693 WDR73Q6P4I2 378 aa13.71□□□□□ -0.22
ATG4B-217ENST00000475693 SPATA3Q8NHX4 192 aa13.71□□□□□ -0.22
ATG4B-217ENST00000475693 SORL1Q92673 2214 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 HIST1H1EP10412 219 aaKnown RBP13.7□□□□□ -0.22
ATG4B-217ENST00000475693 CBLN1P23435 193 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 GNG5P63218 68 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 C16orf54Q6UWD8 224 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 GLMPQ8WWB7 406 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 TMEM14CQ9P0S9 112 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 V9GYV3 84 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 TRBV19A0A075B6N1 114 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 C2orf70A6NJV1 201 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 ZNF785A8K8V0 405 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 OR4F17Q8NGA8 305 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 RPH3ALQ9UNE2 315 aa13.7□□□□□ -0.22
ATG4B-217ENST00000475693 GRIFINA4D1Z8 144 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 SERF1AO75920 110 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 GAGE1Q13065 139 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 OR10J3Q5JRS4 329 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 STXBP6Q8NFX7 210 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 SGK494Q96LW2 274 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 OSTCQ9NRP0 149 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 UFC1Q9Y3C8 167 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 NOTCH3Q9UM47 2321 aa13.69□□□□□ -0.22
ATG4B-217ENST00000475693 PGPA6NDG6 321 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 RPL7P18124 248 aaKnown RBP13.68□□□□□ -0.22
ATG4B-217ENST00000475693 FHL3Q13643 280 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 SIGLEC15Q6ZMC9 328 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 RNF182Q8N6D2 247 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 LINC00479Q96M42 142 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 Q9H3A6 140 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 M0R3E3 92 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 OR9G4Q8NGQ1 327 aa13.68□□□□□ -0.22
ATG4B-217ENST00000475693 K7EMT4 169 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 GNG4P50150 75 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 BAGE3Q86Y29 109 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 BAGE2Q86Y30 109 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 ASCL2Q99929 193 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 HELTA6NFD8 242 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 SNURFLB1AK76 121 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 LGALS9O00182 355 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 TFPI2P48307 235 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 ANKRD39Q53RE8 183 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 ATG101Q9BSB4 218 aa13.67□□□□□ -0.22
ATG4B-217ENST00000475693 ISLRO14498 428 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 DEFB1P60022 68 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 OR4B1Q8NGF8 309 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 VAMP8Q9BV40 100 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 MYCNOSP40205 109 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 ZNF705AQ6ZN79 300 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-217ENST00000475693 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 S100A7AQ86SG5 101 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 CITED1Q99966 193 aa13.66□□□□□ -0.22
ATG4B-217ENST00000475693 GPX1P07203 203 aa13.65□□□□□ -0.22
ATG4B-217ENST00000475693 CSN3P07498 182 aa13.65□□□□□ -0.22
ATG4B-217ENST00000475693 NDUFA11Q86Y39 141 aa13.65□□□□□ -0.22
ATG4B-217ENST00000475693 SAMD10Q9BYL1 202 aa13.65□□□□□ -0.22
ATG4B-217ENST00000475693 TRAV34A0A0B4J273 112 aa13.64□□□□□ -0.23
ATG4B-217ENST00000475693 CENPWQ5EE01 88 aa13.64□□□□□ -0.23
ATG4B-217ENST00000475693 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
ATG4B-217ENST00000475693 A0A1W2PS18 150 aa13.64□□□□□ -0.23
ATG4B-217ENST00000475693 SLC25A5P05141 298 aaKnown RBP13.64□□□□□ -0.23
ATG4B-217ENST00000475693 HLA-DQA1P01909 254 aa13.63□□□□□ -0.23
ATG4B-217ENST00000475693 RASL11AQ6T310 242 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms