RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 SHISA3A0PJX4 238 aa4.45□□□□□ -1.7
CBWD1-212ENST00000475411 HOXD3P31249 432 aaPredicted RBP4.45□□□□□ -1.7
CBWD1-212ENST00000475411 RPL23P62829 140 aaKnown RBP4.45□□□□□ -1.7
CBWD1-212ENST00000475411 FAM53AQ6NSI3 398 aaPredicted RBP4.45□□□□□ -1.7
CBWD1-212ENST00000475411 C5orf56Q8N8D9 126 aa4.45□□□□□ -1.7
CBWD1-212ENST00000475411 LRTM2Q8N967 370 aa4.45□□□□□ -1.7
CBWD1-212ENST00000475411 NAA38Q9BRA0 125 aaKnown RBP4.45□□□□□ -1.7
CBWD1-212ENST00000475411 MED12LQ86YW9 2145 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 PPP1R17O96001 155 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 TMEM258P61165 79 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 NMSQ5H8A3 153 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.44□□□□□ -1.7
CBWD1-212ENST00000475411 WFDC12Q8WWY7 111 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 GNB1LQ9BYB4 327 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 IGHV3OR16-8A0A075B7F1 116 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 IGLC2P0DOY2 106 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 IGLC3P0DOY3 106 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 EVI2AP22794 236 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 DEFB131AP59861 70 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 ACTL10Q5JWF8 245 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 YLPM1P49750 1951 aaKnown RBP4.44□□□□□ -1.7
CBWD1-212ENST00000475411 ANKRD11Q6UB99 2663 aaPredicted RBP4.44□□□□□ -1.7
CBWD1-212ENST00000475411 ARHGAP21Q5T5U3 1957 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 DAD1P61803 113 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 CIRBPQ14011 172 aaKnown RBP4.44□□□□□ -1.7
CBWD1-212ENST00000475411 ZNF56Q15929 161 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 ETDBQ3ZM63 59 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 Q8N7P7 452 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 EPDR1Q9UM22 224 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 RFNGQ9Y644 331 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 A0A1W2PPI3 338 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 LINC00473A8K010 186 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 CDSNQ15517 529 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 C19orf54Q5BKX5 351 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 GOLT1AQ6ZVE7 132 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 BCL6BQ8N143 479 aaPredicted RBP4.44□□□□□ -1.7
CBWD1-212ENST00000475411 CHCHD1Q96BP2 118 aaKnown RBP4.44□□□□□ -1.7
CBWD1-212ENST00000475411 LINC00477Q96M19 166 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 VGLL1Q99990 258 aa4.44□□□□□ -1.7
CBWD1-212ENST00000475411 NCKAP5O14513 1909 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 CRPP02741 224 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 GNG5P63218 68 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 MSMPQ1L6U9 139 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 STPG4Q8N801 248 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 RCHY1Q96PM5 261 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 RTBDNQ9BSG5 229 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-212ENST00000475411 NPCDR1Q9BY65 106 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 NXT2Q9NPJ8 142 aaKnown RBP4.43□□□□□ -1.7
CBWD1-212ENST00000475411 CCDC168Q8NDH2 2452 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 A0A087X0K7 114 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 VWC2LB2RUY7 222 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.43□□□□□ -1.7
CBWD1-212ENST00000475411 IGKV1-16P04430 117 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 C3orf79P0CE67 100 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 MRPL55Q7Z7F7 128 aaKnown RBP4.43□□□□□ -1.7
CBWD1-212ENST00000475411 LHFPL1Q86WI0 220 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 ZNF114Q8NC26 417 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 CFHR4Q92496 578 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 IGHV7-4-1A0A0J9YVY3 117 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 ODF3BA8MYP8 253 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 IGLV1-47P01700 117 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 ATXN8Q156A1 80 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 SPRNQ5BIV9 151 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 CLUHP3Q96NS8 147 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 TNFRSF18Q9Y5U5 241 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 ABCA1O95477 2261 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 CEP295Q9C0D2 2601 aa4.43□□□□□ -1.7
CBWD1-212ENST00000475411 APOHP02749 345 aaPredicted RBP4.42□□□□□ -1.7
CBWD1-212ENST00000475411 RNASE2P10153 161 aaKnown RBP4.42□□□□□ -1.7
CBWD1-212ENST00000475411 ADCYAP1P18509 176 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 CRYBB3P26998 211 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 GCHFRP30047 84 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 PAPPA-AS1Q5QFB9 102 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 FMC1Q96HJ9 113 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 GFI1Q99684 422 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 SELENOKQ9Y6D0 94 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 PLCE1Q9P212 2302 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 IGKV1D-8A0A087WSZ0 117 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 KIR2DL5BA0A0G2JN68 375 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 KIR2DL5BA0A0G2JPC4 375 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 IZUMO1RA6ND01 250 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 RNASE4P34096 147 aaKnown RBP4.42□□□□□ -1.7
CBWD1-212ENST00000475411 CT83Q5H943 113 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 Q6ZSV7 163 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 KIR2DL5AQ8N109 375 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 TMEM256Q8N2U0 113 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 BTCP35070 178 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 FOXA3P55318 350 aaPredicted RBP4.42□□□□□ -1.7
CBWD1-212ENST00000475411 BLCAPP62952 87 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 LINC01559Q495D7 138 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 Q8N9W7 124 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 RMI2Q96E14 147 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 NDUFA4L2Q9NRX3 87 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 FASNP49327 2511 aaKnown RBP4.42□□□□□ -1.7
CBWD1-212ENST00000475411 PSCAO43653 123 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 CD7P09564 240 aa4.42□□□□□ -1.7
CBWD1-212ENST00000475411 ARL14EPLP0DKL9 152 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms