RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 TCRBV4S1A1TA0A5B7 111 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 J3QR89 54 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 NPFFO15130 113 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 DLEU1O43261 78 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 SMIM24O75264 130 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 BLCAPP62952 87 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 Q6ZRN7 208 aaPredicted RBP1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 ARPINQ7Z6K5 226 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 Q8N2B8 174 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 TMEM254Q8TBM7 123 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 CLEC2BQ92478 149 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 LINC00470Q9BZP3 86 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 FKBP11Q9NYL4 201 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 ZFC3H1O60293 1989 aaKnown RBP1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 KDM5CP41229 1560 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 VWDEQ8N2E2 1590 aa1.98□□□□□ -2.09
TM9SF3-204ENST00000475401 USP54Q70EL1 1684 aa1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 F8W036 122 aa1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 LSM3P62310 102 aaKnown RBP1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 C1orf137Q5JT78 98 aa1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 ZNF833PQ6ZTB9 187 aa1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 METTL1Q9UBP6 276 aaKnown RBP1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 LAMB2P55268 1798 aa1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 MDC1Q14676 2089 aaKnown RBP1.97□□□□□ -2.09
TM9SF3-204ENST00000475401 BCL9LQ86UU0 1499 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 TRAV10A0A0B4J240 114 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 FAM236AA0A1B0GUQ0 79 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 FAM236BA0A1B0GV22 79 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 LOC107986453A0A1B0GWG9 222 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 A6NN06 94 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 TRACP01848 142 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 CD3DP04234 171 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 CD14P08571 375 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 HIST1H1BP16401 226 aaKnown RBP1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 SNRPD3P62318 126 aaKnown RBP1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 RPS19BP1Q86WX3 136 aaKnown RBP1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 FAM19A2Q8N3H0 131 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 SLC35B3Q9H1N7 401 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 COMMD3Q9UBI1 195 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 TMEM2Q9UHN6 1383 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 FOCADQ5VW36 1801 aa1.96□□□□□ -2.1
TM9SF3-204ENST00000475401 HEATR5BQ9P2D3 2071 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 PHLPP1O60346 1717 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 RGS12O14924 1447 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 ZNF670-ZNF695F2Z2N8 137 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 C5orf67F2Z3F1 127 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 K7ERU9 68 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 COPZ1P61923 177 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 EMX2Q04743 252 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 GLIPR1L1Q6UWM5 242 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 FP248Q71RG6 208 aaPredicted RBP1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 Q8TAT8 98 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 ARL11Q969Q4 196 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 Q96M85 177 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 SDF2Q99470 211 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 GGACTQ9BVM4 153 aa1.95□□□□□ -2.1
TM9SF3-204ENST00000475401 GRIN2AQ12879 1464 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 KIAA1549Q9HCM3 1950 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 PTPRGP23470 1445 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 MYH1P12882 1939 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 ERC2-IT1O76042 136 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 APOC1P02654 83 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 BRS3P32247 399 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 CIRBPQ14011 172 aaKnown RBP1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 MPC1Q9Y5U8 109 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 MGAMO43451 1857 aa1.94□□□□□ -2.1
TM9SF3-204ENST00000475401 RIMS1Q86UR5 1692 aaKnown RBP1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 GNG7O60262 68 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 C10orf55Q5SWW7 151 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 C2orf82Q6UX34 121 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 OR5AS1Q8N127 324 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 OTOSQ8NHW6 89 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 TMEM191AQ9H0A3 160 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 CST11Q9H112 138 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 NALCNQ8IZF0 1738 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 ADGRB1O14514 1584 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 LAMB4A4D0S4 1761 aa1.93□□□□□ -2.1
TM9SF3-204ENST00000475401 TRBV20-1A0A075B6N2 111 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 C9orf170A2RU37 121 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 MIF4GDA9UHW6 222 aaKnown RBP1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 IGF2P01344 180 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 CXCL8P10145 99 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 ETV6P41212 452 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 PLGLB1Q02325 96 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 FOXI2Q6ZQN5 318 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 COA5Q86WW8 74 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 CLECL1Q8IZS7 167 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 C10orf111Q8N326 155 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 OR5AK2Q8NH90 309 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 C4orf3Q8WVX3 66 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 PATE1Q8WXA2 126 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 LSM2Q9Y333 95 aaKnown RBP1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 ROCK2O75116 1388 aaKnown RBP1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 IBTKQ9P2D0 1353 aaPredicted RBP1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 RP1P56715 2156 aa1.92□□□□□ -2.1
TM9SF3-204ENST00000475401 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 ERBINQ96RT1 1412 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 BRWD1Q9NSI6 2320 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms