RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 CEACAM3P40198 252 aa10.57□□□□□ -0.72
ARHGEF39-203ENST00000475323 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
ARHGEF39-203ENST00000475323 IGKV2D-26A0A0A0MRZ7 120 aa10.56□□□□□ -0.72
ARHGEF39-203ENST00000475323 WI2-2373I1.2A0A1W2PRP0 233 aa10.56□□□□□ -0.72
ARHGEF39-203ENST00000475323 A6NDN8 102 aa10.56□□□□□ -0.72
ARHGEF39-203ENST00000475323 K7EMI3 77 aa10.56□□□□□ -0.72
ARHGEF39-203ENST00000475323 LY6HO94772 140 aa10.56□□□□□ -0.72
ARHGEF39-203ENST00000475323 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
ARHGEF39-203ENST00000475323 GATA1P15976 413 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF39-203ENST00000475323 F8W735 103 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 LY6LH3BQJ8 138 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 J3KRW8 73 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 PRRG2O14669 202 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 EVI2AP22794 236 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 HSD52Q0P140 79 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 KLRD1Q13241 179 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 GTF2H5Q6ZYL4 71 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 OR1N2Q8NGR9 330 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 OR2K2Q8NGT1 345 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 PRR25Q96S07 402 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 K7EP34 96 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 DPF1Q92782 380 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 FANCD2OSQ96PS1 177 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 ATP6V0BQ99437 205 aa10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 ANKHD1Q8IWZ3 2542 aaKnown RBP10.55□□□□□ -0.72
ARHGEF39-203ENST00000475323 HES1Q14469 280 aa10.54□□□□□ -0.72
ARHGEF39-203ENST00000475323 IGHG4P01861 327 aa10.54□□□□□ -0.72
ARHGEF39-203ENST00000475323 RAB9AP51151 201 aa10.54□□□□□ -0.72
ARHGEF39-203ENST00000475323 NDPQ00604 133 aa10.54□□□□□ -0.72
ARHGEF39-203ENST00000475323 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
ARHGEF39-203ENST00000475323 SPTA1P02549 2419 aa10.54□□□□□ -0.72
ARHGEF39-203ENST00000475323 HRNRQ86YZ3 2850 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF39-203ENST00000475323 K7ERJ3 54 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 NBR2O15453 112 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 ORM1P02763 201 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 ERCC8Q13216 396 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 OR9G4Q8NGQ1 327 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 RNF185Q96GF1 192 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 SMAD5-AS1Q9Y6J3 95 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 GCSHP23434 173 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 FXYD2P54710 66 aa10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 PRR30Q53SZ7 412 aaPredicted RBP10.53□□□□□ -0.72
ARHGEF39-203ENST00000475323 A0A1W2PPM0 123 aa10.52□□□□□ -0.72
ARHGEF39-203ENST00000475323 LEPP41159 167 aa10.52□□□□□ -0.72
ARHGEF39-203ENST00000475323 CEP295Q9C0D2 2601 aa10.52□□□□□ -0.72
ARHGEF39-203ENST00000475323 G3V4G9 280 aa10.52□□□□□ -0.73
ARHGEF39-203ENST00000475323 PDE6HQ13956 83 aa10.52□□□□□ -0.73
ARHGEF39-203ENST00000475323 AGRNO00468 2067 aa10.52□□□□□ -0.73
ARHGEF39-203ENST00000475323 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 OR4X2Q8NGF9 303 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 MFAP4P55083 255 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 TCF15Q12870 199 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 CFHR4Q92496 578 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 JKAMPQ9P055 326 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 SPTBN1Q01082 2364 aaKnown RBP10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 IGLV11-55A0A075B6I3 123 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 PRSS1P07477 247 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 GTSCR1Q86UQ5 136 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 LINC01560Q8TB33 94 aa10.51□□□□□ -0.73
ARHGEF39-203ENST00000475323 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 NEGR1Q7Z3B1 354 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 RNF182Q8N6D2 247 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 C21orf62Q9NYP8 219 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 NCBP2LA6PVI3 153 aaKnown RBP10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 SIVA1O15304 175 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 NPFFR1Q9GZQ6 430 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 RAB1BQ9H0U4 201 aa10.5□□□□□ -0.73
ARHGEF39-203ENST00000475323 IGHV3-66A0A0C4DH42 116 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 AZU1P20160 251 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 C5orf64Q2M2E5 130 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 SAMD5Q5TGI4 173 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 PSMG3-AS1Q96PY0 264 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 RNF5Q99942 180 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 SRSF8Q9BRL6 282 aaKnown RBP10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 DPM3Q9P2X0 92 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 IGHV3OR16-13A0A075B7E8 117 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 IGHV3-74A0A0B4J1X5 117 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 Q8NA96 180 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 FOXC2Q99958 501 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 COL25A1Q9BXS0 654 aaPredicted RBP10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 GTSF1LQ9H1H1 148 aa10.49□□□□□ -0.73
ARHGEF39-203ENST00000475323 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 CKS1BP61024 79 aa10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 Q6ZQT7 251 aa10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 TMEM158Q8WZ71 300 aa10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 B9A039 149 aa10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 CTSGP08311 255 aa10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 RPL7P18124 248 aaKnown RBP10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 GRNP28799 593 aaKnown RBP10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 TRAV26-2A0A0B4J265 109 aa10.48□□□□□ -0.73
ARHGEF39-203ENST00000475323 NDUFA3O95167 84 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms