RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 HES1Q14469 280 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 GFRALQ6UXV0 394 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 AAMDCQ9H7C9 122 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 ONECUT1Q9UBC0 465 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 IGHV3-66A0A0C4DH42 116 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 MRPS12O15235 138 aaKnown RBP10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 LEPP41159 167 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 ERCC8Q13216 396 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 SFTA2Q6UW10 78 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 AMTNQ6UX39 209 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 NPFFR1Q9GZQ6 430 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 TMEM160Q9NX00 188 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 SMIM13P0DJ93 91 aa10.72□□□□□ -0.69
SEMA4D-217ENST00000475255 KLRD1Q13241 179 aa10.72□□□□□ -0.69
SEMA4D-217ENST00000475255 WI2-2373I1.2A0A1W2PRP0 233 aa10.72□□□□□ -0.69
SEMA4D-217ENST00000475255 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
SEMA4D-217ENST00000475255 E7EQL1 145 aa10.71□□□□□ -0.69
SEMA4D-217ENST00000475255 ODF1Q14990 250 aa10.71□□□□□ -0.69
SEMA4D-217ENST00000475255 ZNF493Q6ZR52 646 aa10.71□□□□□ -0.69
SEMA4D-217ENST00000475255 FOXC2Q99958 501 aa10.71□□□□□ -0.69
SEMA4D-217ENST00000475255 SPRY2O43597 315 aa10.71□□□□□ -0.7
SEMA4D-217ENST00000475255 PAX8Q06710 450 aa10.71□□□□□ -0.7
SEMA4D-217ENST00000475255 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.7
SEMA4D-217ENST00000475255 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.7
SEMA4D-217ENST00000475255 WFDC12Q8WWY7 111 aa10.71□□□□□ -0.7
SEMA4D-217ENST00000475255 PRR25Q96S07 402 aa10.71□□□□□ -0.7
SEMA4D-217ENST00000475255 RALYQ9UKM9 306 aaKnown RBP10.71□□□□□ -0.7
SEMA4D-217ENST00000475255 Q6ZQT7 251 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 TRAV26-2A0A0B4J265 109 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 J3KRW8 73 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 OR9G4Q8NGQ1 327 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 U3KQK5 164 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 ATRXP46100 2492 aa10.7□□□□□ -0.7
SEMA4D-217ENST00000475255 ZNF292O60281 2723 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 AZU1P20160 251 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 WFDC2Q14508 124 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 NEGR1Q7Z3B1 354 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 COL25A1Q9BXS0 654 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 KLK15Q9H2R5 256 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 A0A1B0GW15 77 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 CIDEAO60543 219 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 C8orf31Q8N9H6 132 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 GATD1Q8NB37 220 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 FAM57AQ8TBR7 257 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 SPTAN1Q13813 2472 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 Q6AWC8 147 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 OR4X2Q8NGF9 303 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 RNF185Q96GF1 192 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 CHAC1Q9BUX1 264 aa10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 TSSC4Q9Y5U2 329 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-217ENST00000475255 MAP1AP78559 2803 aaPredicted RBP10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 H3BMG7 143 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 NDPQ00604 133 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 ZNF562Q6V9R5 426 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 Q6ZS92 163 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 TMEM158Q8WZ71 300 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 NCBP2LA6PVI3 153 aaKnown RBP10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 ETDBQ3ZM63 59 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 ASCL5Q7RTU5 278 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 HHLA3Q9XRX5 114 aa10.68□□□□□ -0.7
SEMA4D-217ENST00000475255 COL6A6A6NMZ7 2263 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 TRAV40A0A0B4J280 105 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 TRBV6-1A0A0K0K1D8 114 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 ARPC1AQ92747 370 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 FANCD2OSQ96PS1 177 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 NDUFA3O95167 84 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 TNFRSF6BO95407 300 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 PRR30Q53SZ7 412 aaPredicted RBP10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 MAPKAPK5-AS1Q8N8E1 139 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 MAP1LC3AQ9H492 121 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 UFC1Q9Y3C8 167 aa10.67□□□□□ -0.7
SEMA4D-217ENST00000475255 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 SHISA9B4DS77 424 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 F8W735 103 aaPredicted RBP10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 TRGV3P03979 118 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 DYNAPQ8N1N2 210 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 SMAD5-AS1Q9Y6J3 95 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 TMEM8BA6NDV4 472 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 CEACAM4O75871 244 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 IGHG4P01861 327 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 KAAG1Q9UBP8 84 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 LYPD1Q8N2G4 141 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 OR5A1Q8NGJ0 315 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 DPF1Q92782 380 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
SEMA4D-217ENST00000475255 ZFHX3Q15911 3703 aa10.65□□□□□ -0.7
SEMA4D-217ENST00000475255 CELSR1Q9NYQ6 3014 aa10.65□□□□□ -0.7
SEMA4D-217ENST00000475255 PRRG2O14669 202 aa10.65□□□□□ -0.7
SEMA4D-217ENST00000475255 NBR2O15453 112 aa10.65□□□□□ -0.7
SEMA4D-217ENST00000475255 EFNA4P52798 201 aa10.65□□□□□ -0.7
SEMA4D-217ENST00000475255 IL17RELQ6ZVW7 336 aa10.65□□□□□ -0.7
SEMA4D-217ENST00000475255 LINC01560Q8TB33 94 aa10.65□□□□□ -0.7
SEMA4D-217ENST00000475255 MRPL35Q9NZE8 188 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms