RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 TRAV12-3A0A0B4J271 114 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 CBY3A6NI87 242 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 F5H768 121 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 ATP5G1P05496 136 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 ATP5G3P48201 142 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 RNF212Q495C1 297 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 CCDC28AQ8IWP9 274 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 ATP5SQ99766 215 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 OR51M1Q9H341 326 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 BATF3Q9NR55 127 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 KCNIP2Q9NS61 270 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 HSPB11Q9Y547 144 aa8.61□□□□□ -1.03
SSR1-205ENST00000475213 IGLV2-18A0A075B6J9 118 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 C17orf112F2Z3M2 114 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 EREGO14944 169 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 SLC25A5P05141 298 aaKnown RBP8.6□□□□□ -1.03
SSR1-205ENST00000475213 NBEAP1P0C6P0 100 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 PET100P0DJ07 73 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 ICAM4Q14773 271 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 LGALS9BQ3B8N2 356 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 LINC00477Q96M19 166 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 PAXXQ9BUH6 204 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 MRPL32Q9BYC8 188 aaKnown RBP8.6□□□□□ -1.03
SSR1-205ENST00000475213 AGPAT4-IT1Q9H0P7 198 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 AAMDCQ9H7C9 122 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 MBD2Q9UBB5 411 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 FUT9Q9Y231 359 aa8.6□□□□□ -1.03
SSR1-205ENST00000475213 KLLNB2CW77 178 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 OR10J4P0C629 311 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 RPL12P30050 165 aaKnown RBP8.59□□□□□ -1.03
SSR1-205ENST00000475213 FAM122CQ6P4D5 195 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 C9orf47Q6ZRZ4 202 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 LINC00336Q6ZUF6 198 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 LINC00612Q8N6U2 182 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 FXYD5Q96DB9 178 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 FAM19A4Q96LR4 140 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 PYGO2Q9BRQ0 406 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 SMIM3Q9BZL3 60 aa8.59□□□□□ -1.03
SSR1-205ENST00000475213 IGKV2-40A0A087WW87 121 aaPredicted RBP8.58□□□□□ -1.04
SSR1-205ENST00000475213 C7orf71A4D174 169 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 RTL8CO15255 209 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 ZNF324O75467 553 aaPredicted RBP8.58□□□□□ -1.04
SSR1-205ENST00000475213 NUDT3O95989 172 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 IGKV2D-40P01614 121 aaPredicted RBP8.58□□□□□ -1.04
SSR1-205ENST00000475213 CD300CQ08708 224 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 BTN1A1Q13410 526 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 FFAR4Q5NUL3 377 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 Q6ZR54 194 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 RNF141Q8WVD5 230 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 ZNF503Q96F45 646 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 PHYHIPLQ96FC7 376 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 VGLL1Q99990 258 aa8.58□□□□□ -1.04
SSR1-205ENST00000475213 OR7C2O60412 319 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 IFNA5P01569 189 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 CRISP2P16562 243 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 RNASE4P34096 147 aaKnown RBP8.57□□□□□ -1.04
SSR1-205ENST00000475213 TMEM78Q5T7P6 136 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 SCGB1C1Q8TD33 95 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 ATG101Q9BSB4 218 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 WFDC1Q9HC57 220 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 ALG5Q9Y673 324 aa8.57□□□□□ -1.04
SSR1-205ENST00000475213 PKHD1P08F94 4074 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 PKD1P98161 4303 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 GAGE12BA1L429 117 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 GAGE7O76087 117 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 GPX1P07203 203 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 GAGE12FP0CL80 117 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 GAGE12GP0CL81 117 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 GAGE12IP0CL82 117 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 FAM3BP58499 235 aaPredicted RBP8.56□□□□□ -1.04
SSR1-205ENST00000475213 DAZ2Q13117 558 aaKnown RBP8.56□□□□□ -1.04
SSR1-205ENST00000475213 PRR9Q5T870 116 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 ZFAND2AQ8N6M9 145 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 C11orf72Q8NBR9 251 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 LINC00467Q9BRT7 94 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 ZNF492Q9P255 531 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 MUC4Q99102 2169 aa8.56□□□□□ -1.04
SSR1-205ENST00000475213 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 NMBP08949 121 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 HOXA5P20719 270 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
SSR1-205ENST00000475213 UBE2L3P68036 154 aaKnown RBP8.55□□□□□ -1.04
SSR1-205ENST00000475213 OR5I1Q13606 314 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 ANXA2RQ3ZCQ2 193 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 KHDC3LQ587J8 217 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 Q6ZQT7 251 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 Q6ZTI0 123 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 LYPD1Q8N2G4 141 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 EIF4E3Q8N5X7 224 aaKnown RBP8.55□□□□□ -1.04
SSR1-205ENST00000475213 ZNF680Q8NEM1 530 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 Q9H3A6 140 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 GSN-AS1Q9NRJ2 163 aa8.55□□□□□ -1.04
SSR1-205ENST00000475213 TRAV26-1A0A087WT03 109 aa8.54□□□□□ -1.04
SSR1-205ENST00000475213 EIF3GO75821 320 aaKnown RBP eCLIP8.54□□□□□ -1.04
SSR1-205ENST00000475213 PTTG1O95997 202 aa8.54□□□□□ -1.04
SSR1-205ENST00000475213 CSN1S1P47710 185 aa8.54□□□□□ -1.04
SSR1-205ENST00000475213 ZNF138P52744 262 aa8.54□□□□□ -1.04
SSR1-205ENST00000475213 TAS2R45P59539 299 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms