RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
TPR-205ENST00000474852 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
TPR-205ENST00000474852 IGKV2D-26A0A0A0MRZ7 120 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 LY6HO94772 140 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 OR9G4Q8NGQ1 327 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 JKAMPQ9P055 326 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 WI2-2373I1.2A0A1W2PRP0 233 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 PAX8Q06710 450 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 KLRD1Q13241 179 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 NBR2O15453 112 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 GATA1P15976 413 aaPredicted RBP12.75□□□□□ -0.37
TPR-205ENST00000474852 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
TPR-205ENST00000474852 SPTBN1Q01082 2364 aaKnown RBP12.74□□□□□ -0.37
TPR-205ENST00000474852 LEPP41159 167 aa12.74□□□□□ -0.37
TPR-205ENST00000474852 SMAGPQ0VAQ4 97 aa12.74□□□□□ -0.37
TPR-205ENST00000474852 A0A1W2PPM0 123 aa12.74□□□□□ -0.37
TPR-205ENST00000474852 FBLL1A6NHQ2 334 aaKnown RBP12.74□□□□□ -0.37
TPR-205ENST00000474852 K7ERJ3 54 aa12.74□□□□□ -0.37
TPR-205ENST00000474852 PRSS1P07477 247 aa12.74□□□□□ -0.37
TPR-205ENST00000474852 AZU1P20160 251 aa12.74□□□□□ -0.37
TPR-205ENST00000474852 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
TPR-205ENST00000474852 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
TPR-205ENST00000474852 FXYD2P54710 66 aa12.73□□□□□ -0.37
TPR-205ENST00000474852 PDE6HQ13956 83 aa12.73□□□□□ -0.37
TPR-205ENST00000474852 FANCD2OSQ96PS1 177 aa12.73□□□□□ -0.37
TPR-205ENST00000474852 NCBP2LA6PVI3 153 aaKnown RBP12.72□□□□□ -0.37
TPR-205ENST00000474852 MFAP4P55083 255 aa12.72□□□□□ -0.37
TPR-205ENST00000474852 ERCC8Q13216 396 aa12.72□□□□□ -0.37
TPR-205ENST00000474852 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
TPR-205ENST00000474852 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
TPR-205ENST00000474852 MAP1LC3AQ9H492 121 aa12.72□□□□□ -0.37
TPR-205ENST00000474852 PTPRZ1P23471 2315 aaPredicted RBP12.71□□□□□ -0.37
TPR-205ENST00000474852 F8W735 103 aaPredicted RBP12.71□□□□□ -0.37
TPR-205ENST00000474852 NDPQ00604 133 aa12.71□□□□□ -0.37
TPR-205ENST00000474852 RAB1BQ9H0U4 201 aa12.71□□□□□ -0.37
TPR-205ENST00000474852 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.71□□□□□ -0.38
TPR-205ENST00000474852 PRSS47A8MTI9 375 aa12.71□□□□□ -0.38
TPR-205ENST00000474852 GTSCR1Q86UQ5 136 aa12.71□□□□□ -0.38
TPR-205ENST00000474852 C21orf62Q9NYP8 219 aa12.71□□□□□ -0.38
TPR-205ENST00000474852 FABP2P12104 132 aa12.7□□□□□ -0.38
TPR-205ENST00000474852 PRR30Q53SZ7 412 aaPredicted RBP12.7□□□□□ -0.38
TPR-205ENST00000474852 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
TPR-205ENST00000474852 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
TPR-205ENST00000474852 SIVA1O15304 175 aa12.7□□□□□ -0.38
TPR-205ENST00000474852 IGLC6P0CF74 106 aa12.7□□□□□ -0.38
TPR-205ENST00000474852 ZNF575Q86XF7 245 aa12.7□□□□□ -0.38
TPR-205ENST00000474852 FOXC2Q99958 501 aa12.7□□□□□ -0.38
TPR-205ENST00000474852 IGLV11-55A0A075B6I3 123 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 IGHV3OR16-13A0A075B7E8 117 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 IGHV3-74A0A0B4J1X5 117 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 IGHV3-66A0A0C4DH42 116 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 TNFRSF6BO95407 300 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 RPL7P18124 248 aaKnown RBP12.69□□□□□ -0.38
TPR-205ENST00000474852 RNF182Q8N6D2 247 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 DPM3Q9P2X0 92 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 SMAD5-AS1Q9Y6J3 95 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 IGHG4P01861 327 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 SMIM13P0DJ93 91 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 ODF1Q14990 250 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 LINC01560Q8TB33 94 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 BMI1P35226 326 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 RNF5Q99942 180 aa12.69□□□□□ -0.38
TPR-205ENST00000474852 SRSF8Q9BRL6 282 aaKnown RBP12.69□□□□□ -0.38
TPR-205ENST00000474852 AGRNO00468 2067 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 C5orf64Q2M2E5 130 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 DYNAPQ8N1N2 210 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 TMEM158Q8WZ71 300 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 CFHR4Q92496 578 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 ARPC1AQ92747 370 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 CHAC1Q9BUX1 264 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 NHP2Q9NX24 153 aaKnown RBP12.68□□□□□ -0.38
TPR-205ENST00000474852 B9A039 149 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 CD3EP07766 207 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 ZC2HC1BQ5TFG8 222 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 ZNF562Q6V9R5 426 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 HHLA3Q9XRX5 114 aa12.68□□□□□ -0.38
TPR-205ENST00000474852 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
TPR-205ENST00000474852 AKAP6Q13023 2319 aa12.67□□□□□ -0.38
TPR-205ENST00000474852 TRAV26-2A0A0B4J265 109 aa12.67□□□□□ -0.38
TPR-205ENST00000474852 OR5A1Q8NGJ0 315 aa12.67□□□□□ -0.38
TPR-205ENST00000474852 ZFHX3Q15911 3703 aa12.67□□□□□ -0.38
TPR-205ENST00000474852 HRNRQ86YZ3 2850 aaPredicted RBP12.67□□□□□ -0.38
TPR-205ENST00000474852 IGKCP01834 107 aa12.66□□□□□ -0.38
TPR-205ENST00000474852 IL17RELQ6ZVW7 336 aa12.66□□□□□ -0.38
TPR-205ENST00000474852 SVIPQ8NHG7 77 aa12.66□□□□□ -0.38
TPR-205ENST00000474852 SIGMAR1Q99720 223 aa12.66□□□□□ -0.38
TPR-205ENST00000474852 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
TPR-205ENST00000474852 TRGV3P03979 118 aa12.66□□□□□ -0.38
TPR-205ENST00000474852 CTSGP08311 255 aa12.66□□□□□ -0.38
TPR-205ENST00000474852 FCER1GP30273 86 aa12.66□□□□□ -0.38
TPR-205ENST00000474852 ZNF672Q499Z4 452 aaPredicted RBP12.66□□□□□ -0.38
TPR-205ENST00000474852 TRBV25-1A0A075B6N4 114 aa12.65□□□□□ -0.38
TPR-205ENST00000474852 TMEM8BA6NDV4 472 aa12.65□□□□□ -0.38
TPR-205ENST00000474852 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
TPR-205ENST00000474852 DTX2Q86UW9 622 aa12.65□□□□□ -0.38
TPR-205ENST00000474852 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
TPR-205ENST00000474852 TRAV40A0A0B4J280 105 aa12.65□□□□□ -0.38
TPR-205ENST00000474852 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.38
TPR-205ENST00000474852 NDUFA3O95167 84 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms