RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 LINC00477Q96M19 166 aa12.84□□□□□ -0.35
DNMT3A-210ENST00000474807 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
DNMT3A-210ENST00000474807 LRP1BQ9NZR2 4599 aa12.84□□□□□ -0.35
DNMT3A-210ENST00000474807 C7orf71A4D174 169 aa12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 SOHLH1Q5JUK2 328 aa12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 C1orf134Q5TEV5 83 aa12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 C9orf47Q6ZRZ4 202 aa12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 PPP1R1CQ8WVI7 109 aa12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 AAMDCQ9H7C9 122 aa12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 LINC00588Q9Y4M8 146 aa12.83□□□□□ -0.36
DNMT3A-210ENST00000474807 GAGE12BA1L429 117 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 GAGE7O76087 117 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 GAGE12FP0CL80 117 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 GAGE12GP0CL81 117 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 GAGE12IP0CL82 117 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 HOXA5P20719 270 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 CCL18P55774 89 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 DAZ2Q13117 558 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 OR5I1Q13606 314 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 ICAM4Q14773 271 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 MRPL32Q9BYC8 188 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 KRTAP17-1Q9BYP8 105 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 OR51M1Q9H341 326 aa12.82□□□□□ -0.36
DNMT3A-210ENST00000474807 TRAV26-1A0A087WT03 109 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 CRISP2P16562 243 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 CD300CQ08708 224 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 BTN1A1Q13410 526 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 C11orf72Q8NBR9 251 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 FXYD5Q96DB9 178 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 KCNIP2Q9NS61 270 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 FUT9Q9Y231 359 aa12.81□□□□□ -0.36
DNMT3A-210ENST00000474807 NBDYA0A0U1RRE5 68 aa12.8□□□□□ -0.36
DNMT3A-210ENST00000474807 M6PRP20645 277 aa12.8□□□□□ -0.36
DNMT3A-210ENST00000474807 FAM122CQ6P4D5 195 aa12.8□□□□□ -0.36
DNMT3A-210ENST00000474807 Q6ZTI0 123 aa12.8□□□□□ -0.36
DNMT3A-210ENST00000474807 GNPNAT1Q96EK6 184 aaPredicted RBP12.8□□□□□ -0.36
DNMT3A-210ENST00000474807 ZNF503Q96F45 646 aa12.8□□□□□ -0.36
DNMT3A-210ENST00000474807 VGLL1Q99990 258 aa12.8□□□□□ -0.36
DNMT3A-210ENST00000474807 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 C17orf112F2Z3M2 114 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 MPC2O95563 127 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 NMBP08949 121 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 OR10J4P0C629 311 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 ANXA2RQ3ZCQ2 193 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 ZNF680Q8NEM1 530 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 RXFP4Q8TDU9 374 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 ATP5SQ99766 215 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
DNMT3A-210ENST00000474807 A0A0J9YY99 117 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 GPX1P07203 203 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 RNASE4P34096 147 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 PRR9Q5T870 116 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 SSX7Q7RTT5 188 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 EIF4E3Q8N5X7 224 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 ZFAND2AQ8N6M9 145 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 PHYHIPLQ96FC7 376 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 C18orf15Q96N68 181 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 TMPRSS5Q9H3S3 457 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 ZNF492Q9P255 531 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 DNAH5Q8TE73 4624 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 HSPG2P98160 4391 aa12.78□□□□□ -0.36
DNMT3A-210ENST00000474807 H3BNG1 76 aa12.77□□□□□ -0.37
DNMT3A-210ENST00000474807 SSNA1O43805 119 aa12.77□□□□□ -0.37
DNMT3A-210ENST00000474807 DEFA1P59665 94 aa12.77□□□□□ -0.37
DNMT3A-210ENST00000474807 DEFA3P59666 94 aa12.77□□□□□ -0.37
DNMT3A-210ENST00000474807 PET100P0DJ07 73 aa12.76□□□□□ -0.37
DNMT3A-210ENST00000474807 Q6ZQT7 251 aa12.76□□□□□ -0.37
DNMT3A-210ENST00000474807 OR7C2O60412 319 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 RPL12P30050 165 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 TCL1AP56279 114 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 FFAR4Q5NUL3 377 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 IBA57Q5T440 356 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 LYPD1Q8N2G4 141 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 C6orf223Q8N319 242 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 Q9H8V8 135 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 KLF12Q9Y4X4 402 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 ABCA13Q86UQ4 5058 aa12.75□□□□□ -0.37
DNMT3A-210ENST00000474807 TRBV7-9A0A0J9YWB2 115 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 SPINK4O60575 86 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 ZNF138P52744 262 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 RANP62826 216 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 TNP2Q05952 138 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 ESRGQ1W209 222 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 VSIG2Q96IQ7 327 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 SMIM3Q9BZL3 60 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 MBD2Q9UBB5 411 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 TP53TG3Q9ULZ0 132 aa12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 APOBP04114 4563 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-210ENST00000474807 TRGV2A0A075B6R0 118 aa12.73□□□□□ -0.37
DNMT3A-210ENST00000474807 IGHV1OR15-1A0A075B7D0 117 aa12.73□□□□□ -0.37
DNMT3A-210ENST00000474807 TRGV1A0A0A0MS02 117 aa12.73□□□□□ -0.37
DNMT3A-210ENST00000474807 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms