RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PLGLAQ15195 96 aa14.54□□□□□ -0.08
ECHDC1-214ENST00000474289 PRR25Q96S07 402 aa14.54□□□□□ -0.08
ECHDC1-214ENST00000474289 C22orf34Q6ZV56 151 aa14.54□□□□□ -0.08
ECHDC1-214ENST00000474289 COX8CQ7Z4L0 72 aa14.54□□□□□ -0.08
ECHDC1-214ENST00000474289 Q8TAT8 98 aa14.54□□□□□ -0.08
ECHDC1-214ENST00000474289 RP1L1Q8IWN7 2480 aaPredicted RBP14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 K7EIM0 57 aa14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 PDE6HQ13956 83 aa14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 LINC01559Q495D7 138 aa14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 LYPD2Q6UXB3 125 aa14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 DLX6P56179 175 aa14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 CDIP1Q9H305 208 aa14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 FBXL15Q9H469 300 aa14.53□□□□□ -0.08
ECHDC1-214ENST00000474289 FOXI1Q12951 378 aa14.52□□□□□ -0.08
ECHDC1-214ENST00000474289 C8orf86Q6ZUL3 223 aa14.52□□□□□ -0.08
ECHDC1-214ENST00000474289 SYT8Q8NBV8 401 aa14.52□□□□□ -0.08
ECHDC1-214ENST00000474289 LAMA5O15230 3695 aa14.52□□□□□ -0.09
ECHDC1-214ENST00000474289 TRBV7-3A0A075B6L6 115 aa14.52□□□□□ -0.09
ECHDC1-214ENST00000474289 IGHV1-8P0DP01 117 aa14.51□□□□□ -0.09
ECHDC1-214ENST00000474289 DLX1P56177 255 aa14.51□□□□□ -0.09
ECHDC1-214ENST00000474289 LCNL1Q6ZST4 164 aa14.51□□□□□ -0.09
ECHDC1-214ENST00000474289 CNFNQ9BYD5 112 aa14.51□□□□□ -0.09
ECHDC1-214ENST00000474289 TRAV17A0A0B4J275 112 aa14.51□□□□□ -0.09
ECHDC1-214ENST00000474289 NDUFB3O43676 98 aa14.51□□□□□ -0.09
ECHDC1-214ENST00000474289 C1QTNF4Q9BXJ3 329 aa14.51□□□□□ -0.09
ECHDC1-214ENST00000474289 IGLV2-18A0A075B6J9 118 aa14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 LOXP28300 417 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 PRB3Q04118 309 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 MORN3Q6PF18 240 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 ZNF418Q8TF45 676 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 CSMD1Q96PZ7 3565 aa14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 C3orf36Q3SXR2 165 aa14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 PRSS33Q8NF86 280 aa14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 ZNF48Q96MX3 618 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 PSMG3-AS1Q96PY0 264 aa14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 CTSZQ9UBR2 303 aa14.5□□□□□ -0.09
ECHDC1-214ENST00000474289 PKDREJQ9NTG1 2253 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 ORM1P02763 201 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 SPINK8P0C7L1 97 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 Q8N8P6 123 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 S4R3C0 116 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 MBD3L4A6NDZ8 208 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 MBD3L3A6NE82 208 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 MBD3L5A6NJ08 208 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 SMCPP49901 116 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 KLRD1Q13241 179 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 FHL3Q13643 280 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 TMEM155Q4W5P6 130 aa14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 MBD3L2Q8NHZ7 208 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-214ENST00000474289 NCBP2LA6PVI3 153 aaKnown RBP14.48□□□□□ -0.09
ECHDC1-214ENST00000474289 CFAP126Q5VTH2 177 aa14.48□□□□□ -0.09
ECHDC1-214ENST00000474289 NFE4Q86UQ8 179 aa14.48□□□□□ -0.09
ECHDC1-214ENST00000474289 CYSLTR1Q9Y271 337 aa14.48□□□□□ -0.09
ECHDC1-214ENST00000474289 IGHV1-3A0A0C4DH29 117 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 NDUFA3O95167 84 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 MT-ATP8P03928 68 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 CD40P25942 277 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 PLA2G2CQ5R387 149 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 IGFL2Q6UWQ7 119 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 DTX2Q86UW9 622 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 RPEQ96AT9 228 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 A0A087WX48 190 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 TMEM178BH3BS89 294 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 ATP6V0E2Q8NHE4 81 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 MYOZ3Q8TDC0 251 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 CCL17Q92583 94 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 TACC2O95359 2948 aa14.47□□□□□ -0.09
ECHDC1-214ENST00000474289 C17orf100A8MU93 164 aa14.46□□□□□ -0.09
ECHDC1-214ENST00000474289 FAM27E3Q08E93 113 aa14.46□□□□□ -0.09
ECHDC1-214ENST00000474289 PGPEP1Q9NXJ5 209 aa14.46□□□□□ -0.09
ECHDC1-214ENST00000474289 FAM215AQ9Y5M1 114 aa14.46□□□□□ -0.09
ECHDC1-214ENST00000474289 TNFRSF13BO14836 293 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-214ENST00000474289 PLNP26678 52 aa14.45□□□□□ -0.1
ECHDC1-214ENST00000474289 IGFL4Q6B9Z1 124 aa14.45□□□□□ -0.1
ECHDC1-214ENST00000474289 XGP55808 180 aa14.45□□□□□ -0.1
ECHDC1-214ENST00000474289 Q6ZUT4 128 aa14.45□□□□□ -0.1
ECHDC1-214ENST00000474289 GLMPQ8WWB7 406 aa14.45□□□□□ -0.1
ECHDC1-214ENST00000474289 TPRP12270 2363 aaKnown RBP14.45□□□□□ -0.1
ECHDC1-214ENST00000474289 LINC01619G3V211 115 aa14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 HOXA3O43365 443 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 CNIH1O95406 144 aa14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 SRSF2Q01130 221 aaKnown RBP14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 Q6ZS92 163 aa14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 HLA-DMBP28068 263 aa14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 EFNA4P52798 201 aa14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 LAGE3Q14657 143 aa14.44□□□□□ -0.1
ECHDC1-214ENST00000474289 MYMXA0A1B0GTQ4 84 aa14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 IGLV1-47P01700 117 aa14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 IGHG4P01861 327 aa14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 DLX4Q92988 240 aaPredicted RBP14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 TSPAN13O95857 204 aa14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 TRGV3P03979 118 aa14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 GFRALQ6UXV0 394 aa14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 ZGRF1Q86YA3 2104 aa14.43□□□□□ -0.1
ECHDC1-214ENST00000474289 ADGRG4Q8IZF6 3080 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 FABP5P3A8MUU1 101 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 OR11H12B2RN74 326 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 DEFB109BQ30KR1 87 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 NUP37Q8NFH4 326 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 OR11H1Q8NG94 326 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms